RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 POU3F1Q03052 451 aaPredicted RBP16.62■□□□□ 0.25
CCDC50-202ENST00000392456 ZNF85Q03923 595 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 EMC4Q5J8M3 183 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 WIPI1Q5MNZ9 446 aaPredicted RBP16.62■□□□□ 0.25
CCDC50-202ENST00000392456 OR2T2Q6IF00 324 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 EIF5AL1Q6IS14 154 aaKnown RBP16.62■□□□□ 0.25
CCDC50-202ENST00000392456 OR2M7Q8NG81 312 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 ZNF671Q8TAW3 534 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 MUCL1Q96DR8 90 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 ALG12Q9BV10 488 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 ZNF552Q9H707 407 aaPredicted RBP16.62■□□□□ 0.25
CCDC50-202ENST00000392456 ALKBH4Q9NXW9 302 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 MMP24Q9Y5R2 645 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 ATMQ13315 3056 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 CELA3AP09093 270 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 RPS27P42677 84 aaKnown RBP16.61■□□□□ 0.25
CCDC50-202ENST00000392456 CCL11P51671 97 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 OR14L1PQ8NHC6 308 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 TRAV1-2A0A0B4J238 106 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 TEX13DA0A0J9YY54 714 aaPredicted RBP16.61■□□□□ 0.25
CCDC50-202ENST00000392456 TVP23AA6NH52 213 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 ACOT7O00154 380 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 SMPD2O60906 423 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 PTHLHP12272 177 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 IRF2P14316 349 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 ASB17Q8WXJ9 295 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 CACNA1GO43497 2377 aa16.61■□□□□ 0.25
CCDC50-202ENST00000392456 IGHV3-15A0A0B4J1V0 119 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 DAPL1A0PJW8 107 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 PMS2P2O95744 297 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 SELEP16581 610 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 SRD5A2P31213 254 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 FAUP35544 74 aaKnown RBP16.6■□□□□ 0.25
CCDC50-202ENST00000392456 ZP4Q12836 540 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 ZNF529Q6P280 563 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 GALNTL5Q7Z4T8 443 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 SYT9Q86SS6 491 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 OR56B2PQ8NGI1 322 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 OR4C16Q8NGL9 310 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 MIB2Q96AX9 1013 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 CLUHP3Q96NS8 147 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 B3GALT5Q9Y2C3 310 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 V9GYS6 101 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 A0A0J9YW62 118 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 PRSS37A4D1T9 235 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 NKX6-3A6NJ46 265 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 ZNF705GA8MUZ8 300 aaPredicted RBP16.6■□□□□ 0.25
CCDC50-202ENST00000392456 IL6RP08887 468 aaPredicted RBP16.6■□□□□ 0.25
CCDC50-202ENST00000392456 GDF1P27539 372 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 BRS3P32247 399 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 SLC25A1P53007 311 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 HSF1Q00613 529 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 DCXRQ7Z4W1 244 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 FDCSPQ8NFU4 85 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 SEMA6DQ8NFY4 1073 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 OR13D1Q8NGV5 346 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 SLC25A43Q8WUT9 341 aaPredicted RBP16.6■□□□□ 0.25
CCDC50-202ENST00000392456 PLEKHA2Q9HB19 425 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 ABI3Q9P2A4 366 aa16.6■□□□□ 0.25
CCDC50-202ENST00000392456 PRR32B1ATL7 298 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 XKRYO14609 159 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 PGAM2P15259 253 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 CTLA4P16410 223 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 FOXC1Q12948 553 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 SLC35D2Q76EJ3 337 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 KCTD9Q7L273 389 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.59■□□□□ 0.25
CCDC50-202ENST00000392456 FAM185AQ8N0U4 392 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 PGLYRP3Q96LB9 341 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 UCN2Q96RP3 112 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 IGKV1D-43A0A0B4J1Z2 117 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 A0A0B4J2A0 478 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 DLL1O00548 723 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 TNFSF11O14788 317 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 MT-ND5P03915 603 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 OR12D2P58182 307 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 FMODQ06828 376 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 GGTLC2Q14390 218 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 ACSM3Q53FZ2 586 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 SSX7Q7RTT5 188 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 MDS2Q8NDY4 140 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 ASB10Q8WXI3 467 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 TNFRSF14Q92956 283 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 FAM173AQ9BQD7 235 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 WDR76Q9H967 626 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 KLHL13Q9P2N7 655 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 SHPKQ9UHJ6 478 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 ZFP30Q9Y2G7 519 aa16.59■□□□□ 0.25
CCDC50-202ENST00000392456 MAP1BP46821 2468 aaKnown RBP16.58■□□□□ 0.25
CCDC50-202ENST00000392456 FAM166BA8MTA8 275 aa16.58■□□□□ 0.25
CCDC50-202ENST00000392456 ZNF432O94892 652 aa16.58■□□□□ 0.25
CCDC50-202ENST00000392456 IGHMP01871 453 aa16.58■□□□□ 0.25
CCDC50-202ENST00000392456 TRGC1P0CF51 173 aa16.58■□□□□ 0.25
CCDC50-202ENST00000392456 CLDN15P56746 228 aa16.58■□□□□ 0.25
CCDC50-202ENST00000392456 SELENOTP62341 195 aa16.58■□□□□ 0.25
CCDC50-202ENST00000392456 ZNF775Q96BV0 537 aaPredicted RBP16.58■□□□□ 0.25
CCDC50-202ENST00000392456 FOXJ3Q9UPW0 622 aa16.58■□□□□ 0.25
CCDC50-202ENST00000392456 KCNAB3O43448 404 aa16.58■□□□□ 0.24
CCDC50-202ENST00000392456 SLC16A7O60669 478 aa16.58■□□□□ 0.24
CCDC50-202ENST00000392456 RENP00797 406 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms