RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 HIST1H4GQ99525 98 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 APOL4Q9BPW4 351 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 CHCHD5Q9BSY4 110 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 MED18Q9BUE0 208 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 EMC6Q9BV81 110 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 TIPINQ9BVW5 301 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 YTHDF1Q9BYJ9 559 aaKnown RBP1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 SLC29A3Q9BZD2 475 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 UBXN6Q9BZV1 441 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 ZBP1Q9H171 429 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 MS4A6AQ9H2W1 248 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 FBXL15Q9H469 300 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 C11orf49Q9H6J7 331 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 JPT2Q9H910 190 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 MYOZ1Q9NP98 299 aaPredicted RBP1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 EXOSC4Q9NPD3 245 aaKnown RBP1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 RRAGDQ9NQL2 400 aaPredicted RBP1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 C8orf4Q9NR00 106 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 RGS18Q9NS28 235 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 AIG1Q9NVV5 245 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 RBFOX1Q9NWB1 397 aaKnown RBP1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 FAM206AQ9NX38 181 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 VAX2Q9UIW0 290 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 VPREB3Q9UKI3 123 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 NDRG2Q9UN36 371 aaKnown RBP1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 MOKQ9UQ07 419 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 C14orf166Q9Y224 244 aaKnown RBP1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 FARSAQ9Y285 508 aaKnown RBP1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 ARL2BPQ9Y2Y0 163 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 SLC25A15Q9Y619 301 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 F11RQ9Y624 299 aaKnown RBP1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 V9GYQ6 96 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 CHD9Q3L8U1 2897 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 PLEKHG1Q9ULL1 1385 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 COL12A1Q99715 3063 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 TMEM131Q92545 1883 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 COL3A1P02461 1466 aaPredicted RBP1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 NKTRP30414 1462 aaKnown RBP1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 MBD5Q9P267 1494 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 BDP1A6H8Y1 2624 aa1.18□□□□□ -2.22
RNU1-78P-201ENST00000391248 NCANO14594 1321 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 KIF1BO60333 1816 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 SLX4Q8IY92 1834 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 GCN1Q92616 2671 aaKnown RBP1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 CNTLNQ9NXG0 1405 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 NCOA3Q9Y6Q9 1424 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 TULP4Q9NRJ4 1543 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 IGKV1-27A0A075B6S5 117 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 IGHV3OR16-13A0A075B7E8 117 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 TRAV8-4A0A0B4J246 113 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 TRAV8-6A0A0B4J262 113 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 IGHV3-16A0A0C4DH30 117 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 IGKV1-8A0A0C4DH67 115 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 A6NDN8 102 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 RBFOX3A6NFN3 312 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 METTL15A6NJ78 407 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 C2orf74A8MZ97 194 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 H3BQV1 296 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 K7EQS6 105 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 PSMD12O00232 456 aaPredicted RBP1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 KPNA3O00505 521 aaPredicted RBP1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 CHP2O43745 196 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 SSNA1O43805 119 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 NDUFS5O43920 106 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 UGT2B11O75310 529 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 ZNF253O75346 499 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 UPK1BO75841 260 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 SNAPINO95295 136 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 KRT75O95678 551 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 TTC4O95801 387 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 P01737 135 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 ISG15P05161 165 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 BCHEP06276 602 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 GIPP09681 153 aaPredicted RBP1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 CSF3P09919 207 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 GKN3PP0CG01 181 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 HIST1H1EP10412 219 aaKnown RBP1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 GABRA1P14867 456 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 AKR1C4P17516 323 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 CXCL2P19875 107 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 CXCL3P19876 107 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 ME2P23368 584 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 MSNP26038 577 aaKnown RBP1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 RPL12P30050 165 aaKnown RBP1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 TSPOP30536 169 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 CCR7P32248 378 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 PFN2P35080 140 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 RCVRNP35243 200 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 PPICP45877 212 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 OMPP47874 163 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 OR3A4PP47883 348 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 CYB561P49447 251 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 NCBP2P52298 156 aaKnown RBP eCLIP1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 FGF8P55075 233 aaPredicted RBP1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 RUNX1Q01196 453 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 OR2F1Q13607 317 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 RUNX3Q13761 415 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 FAM53BQ14153 422 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 ALX1Q15699 326 aa1.17□□□□□ -2.22
RNU1-78P-201ENST00000391248 MAPK14Q16539 360 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms