RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 APH1BQ8WW43 257 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 SRRQ9GZT4 340 aa9.04□□□□□ -0.96
PKP4-201ENST00000389757 A0A1B0GVG6 124 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 C4orf51C9J302 202 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 RPL12P30050 165 aaKnown RBP9.03□□□□□ -0.96
PKP4-201ENST00000389757 CTF1Q16619 201 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 FAM27BQ5VT28 67 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 ZNF665Q9H7R5 613 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 KIF13BQ9NQT8 1826 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 ZNF236Q9UL36 1845 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 CTAG2O75638 210 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 SEMG1P04279 462 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 F2RP25116 425 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 HABP2Q14520 560 aaPredicted RBP9.03□□□□□ -0.96
PKP4-201ENST00000389757 OR5H14A6NHG9 310 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 TMEM210A6NLX4 147 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 HAND1O96004 215 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 H2AFB1P0C5Y9 115 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 LIMK1P53667 647 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 SCGB2A2Q13296 93 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 SSX1Q16384 188 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 ACOT6Q3I5F7 207 aaPredicted RBP9.03□□□□□ -0.96
PKP4-201ENST00000389757 TPPP3Q9BW30 176 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 HEXA-AS1Q9H8Q6 139 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 MSL2Q9HCI7 577 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 SLC7A10Q9NS82 523 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 FRRS1LQ9P0K9 344 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 A0A1W2PRD5 423 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 A0A1W2PRF3 423 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 A0A1W2PRM7 423 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 OGG1O15527 345 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 CT45A10P0DMU9 189 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 KIR2DS2P43631 304 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 TMEM182Q6ZP80 229 aaPredicted RBP9.03□□□□□ -0.96
PKP4-201ENST00000389757 ACOT7LQ6ZUV0 252 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 SPICQ8N5J4 248 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 LFNGQ8NES3 379 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 OR5A2Q8NGI9 324 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 NMES1Q9C002 83 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 NME2P1O60361 137 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 ASAH2BP0C7U1 165 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 BMI1P35226 326 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 HMGN3Q15651 99 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 LINC00303Q3SY05 128 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 CDH26Q8IXH8 852 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 OR2D2Q9H210 308 aa9.03□□□□□ -0.96
PKP4-201ENST00000389757 ZNF205O95201 554 aa9.02□□□□□ -0.96
PKP4-201ENST00000389757 GPR6P46095 362 aaPredicted RBP9.02□□□□□ -0.96
PKP4-201ENST00000389757 IGLV3-21P80748 117 aaPredicted RBP9.02□□□□□ -0.96
PKP4-201ENST00000389757 SVBPQ8N300 66 aa9.02□□□□□ -0.96
PKP4-201ENST00000389757 FDCSPQ8NFU4 85 aa9.02□□□□□ -0.96
PKP4-201ENST00000389757 OR2J1Q9GZK6 312 aa9.02□□□□□ -0.96
PKP4-201ENST00000389757 CLN8Q9UBY8 286 aa9.02□□□□□ -0.96
PKP4-201ENST00000389757 A0A0A6YYJ9 748 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 PTP4A3O75365 173 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 CLN5O75503 358 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 HLXQ14774 488 aaPredicted RBP9.02□□□□□ -0.97
PKP4-201ENST00000389757 PXT1Q8NFP0 134 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 IL36GQ9NZH8 169 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 MIA3Q5JRA6 1907 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 IGHA1P01876 353 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 MBP02144 154 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 MMP16P51512 607 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 SSX2Q16385 188 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 XAF1Q6GPH4 301 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 YIPF5Q969M3 257 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 ACY3Q96HD9 319 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 ACTR3CQ9C0K3 210 aaPredicted RBP9.02□□□□□ -0.97
PKP4-201ENST00000389757 MTCH1Q9NZJ7 389 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 AK3Q9UIJ7 227 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 LIPGQ9Y5X9 500 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 OR7C2O60412 319 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 LPAR6P43657 344 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 SLC25A30Q5SVS4 291 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 ADTRPQ96IZ2 230 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 NIPSNAP3BQ9BS92 247 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 ADAM19Q9H013 955 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 SLC52A3Q9NQ40 469 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 ARID2Q68CP9 1835 aa9.02□□□□□ -0.97
PKP4-201ENST00000389757 F2RL2O00254 374 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 COX5AP20674 150 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 LSM11P83369 360 aaKnown RBP eCLIP9.01□□□□□ -0.971e-13■■□□□ 13.2
PKP4-201ENST00000389757 Q6ZNX1 250 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 LRRTM1Q86UE6 522 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 KCNRGQ8N5I3 272 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 ZDHHC22Q8N966 263 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 SCNM1Q9BWG6 230 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 CA10Q9NS85 328 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 MTFP1Q9UDX5 166 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 RNF24Q9Y225 148 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 OR4C45A6NMZ5 311 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 NUDT19A8MXV4 375 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 IL5P05113 134 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 PTHLHP12272 177 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 IL11P20809 199 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 PCMT1P22061 227 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 MRPS11P82912 194 aaKnown RBP9.01□□□□□ -0.97
PKP4-201ENST00000389757 BAK1Q16611 211 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 FHL5Q5TD97 284 aa9.01□□□□□ -0.97
PKP4-201ENST00000389757 OR10AC1Q8NH08 325 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms