RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 PLPP3O14495 311 aa16.66■□□□□ 0.26
CSPG5-202ENST00000383738 POLR2GP62487 172 aaKnown RBP eCLIP16.66■□□□□ 0.26
CSPG5-202ENST00000383738 TMEM128Q5BJH2 165 aa16.66■□□□□ 0.26
CSPG5-202ENST00000383738 MESTQ5EB52 335 aa16.66■□□□□ 0.26
CSPG5-202ENST00000383738 C20orf196Q8IYI0 205 aa16.66■□□□□ 0.26
CSPG5-202ENST00000383738 SOSTQ9BQB4 213 aa16.66■□□□□ 0.26
CSPG5-202ENST00000383738 PATZ1Q9HBE1 687 aaKnown RBP16.66■□□□□ 0.26
CSPG5-202ENST00000383738 CDRT15L2A8MXV6 281 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 CTDSPLO15194 276 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 ACTL6AO96019 429 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 NGFRP08138 427 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 ZNRF4Q8WWF5 429 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 ZNF764Q96H86 408 aaPredicted RBP16.65■□□□□ 0.26
CSPG5-202ENST00000383738 IP6K3Q96PC2 410 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 NRIP2Q9BQI9 281 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 AK3Q9UIJ7 227 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 TNFSF18Q9UNG2 199 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 PMS2P1A4D2B8 440 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 TRAPPC2LH3BP13 241 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 ZNF684Q5T5D7 378 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 AMELYQ99218 206 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 VSIG4Q9Y279 399 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 FANCMQ8IYD8 2048 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 ZNF727A8MUV8 499 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 MGAT2Q10469 447 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 MCHR2Q969V1 340 aa16.65■□□□□ 0.26
CSPG5-202ENST00000383738 FREM3P0C091 2139 aa16.64■□□□□ 0.26
CSPG5-202ENST00000383738 BTBD17A6NE02 478 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 CEBPZOSA8MTT3 80 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 HMGB3O15347 200 aaKnown RBP16.64■□□□□ 0.25
CSPG5-202ENST00000383738 RNF224P0DH78 156 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 ELLP55199 621 aaPredicted RBP16.64■□□□□ 0.25
CSPG5-202ENST00000383738 EXD3Q8N9H8 876 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 OTOSQ8NHW6 89 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 PBOV1Q9GZY1 135 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 PHF3Q92576 2039 aaKnown RBP16.64■□□□□ 0.25
CSPG5-202ENST00000383738 AP4M1O00189 453 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 ARPC3O15145 178 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 ZNF774Q6NX45 483 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 C2orf50Q96LR7 162 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 TMPRSS5Q9H3S3 457 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 OR4C45A6NMZ5 311 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 MMP7P09237 267 aaPredicted RBP16.64■□□□□ 0.25
CSPG5-202ENST00000383738 OR8U1Q8NH10 309 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 FOXB1Q99853 325 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 CNTD2Q9H8S5 307 aa16.64■□□□□ 0.25
CSPG5-202ENST00000383738 PRRG2O14669 202 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 IGLV3-19P01714 112 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 ZNF728P0DKX0 622 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 TMEM33P57088 247 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 EMC4Q5J8M3 183 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 SLC23A3Q6PIS1 610 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 CXorf67Q86X51 503 aaPredicted RBP16.63■□□□□ 0.25
CSPG5-202ENST00000383738 WFDC8Q8IUA0 241 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 ARHGAP5-AS1Q96IT6 56 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 ZNF385AQ96PM9 386 aaKnown RBP16.63■□□□□ 0.25
CSPG5-202ENST00000383738 DYNLRB1Q9NP97 96 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 LPAR3Q9UBY5 353 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 A0A087X0M5 115 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.63■□□□□ 0.25
CSPG5-202ENST00000383738 A0A1B0GX30 115 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 HS3ST1O14792 307 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 GSK3AP49840 483 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 OR2B11Q5JQS5 317 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 CDCP2Q5VXM1 449 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 RDH5Q92781 318 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 SARAFQ96BY9 339 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 PIK3IP1Q96FE7 263 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 GSN-AS1Q9NRJ2 163 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 OR5AC2Q9NZP5 309 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 WASF3Q9UPY6 502 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 RCL1Q9Y2P8 373 aaKnown RBP16.63■□□□□ 0.25
CSPG5-202ENST00000383738 FLVCR1Q9Y5Y0 555 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 CHD7Q9P2D1 2997 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 MYLKQ15746 1914 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 ABCA1O95477 2261 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 NDUFS6O75380 124 aaKnown RBP16.63■□□□□ 0.25
CSPG5-202ENST00000383738 SMIM6P0DI80 62 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 RAB5AP20339 215 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 RAB1AP62820 205 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 INSM1Q01101 510 aaPredicted RBP16.63■□□□□ 0.25
CSPG5-202ENST00000383738 EDDM3AQ14507 147 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 MSTNO14793 375 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 ADAM11O75078 769 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 TAS2R46P59540 309 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 MFGE8Q08431 387 aaPredicted RBP16.63■□□□□ 0.25
CSPG5-202ENST00000383738 HMGN3Q15651 99 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 MPPED2Q15777 294 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 CPNE4Q96A23 557 aaPredicted RBP16.63■□□□□ 0.25
CSPG5-202ENST00000383738 OR8B4Q96RC9 309 aa16.63■□□□□ 0.25
CSPG5-202ENST00000383738 ONECUT2O95948 504 aa16.62■□□□□ 0.25
CSPG5-202ENST00000383738 SERPINE2P07093 398 aa16.62■□□□□ 0.25
CSPG5-202ENST00000383738 OR13C8Q8NGS7 320 aa16.62■□□□□ 0.25
CSPG5-202ENST00000383738 CTHRC1Q96CG8 243 aa16.62■□□□□ 0.25
CSPG5-202ENST00000383738 RRNAD1Q96FB5 475 aaKnown RBP16.62■□□□□ 0.25
CSPG5-202ENST00000383738 TRAV17A0A0B4J275 112 aa16.62■□□□□ 0.25
CSPG5-202ENST00000383738 A0A1B0GV90 55 aa16.62■□□□□ 0.25
CSPG5-202ENST00000383738 IRF2P14316 349 aa16.62■□□□□ 0.25
CSPG5-202ENST00000383738 RPS2P15880 293 aaKnown RBP16.62■□□□□ 0.25
CSPG5-202ENST00000383738 ZNF32P17041 273 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms