RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 NDUFB11Q9NX14 153 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 LPAR3Q9UBY5 353 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 TLN2Q9Y4G6 2542 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 HIVEP2P31629 2446 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 A0A1W2PPK0 400 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 RFPL4AA6NLU0 287 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 RFPL4AL1F8VTS6 287 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 GABRPO00591 440 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 DVL1O14640 695 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 PHF1O43189 567 aaPredicted RBP11.01□□□□□ -0.65
CKAP2-202ENST00000378034 ARL6IP5O75915 188 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 UCHL1P09936 223 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 AMY2BP19961 511 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 BCL3P20749 454 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 GALP22466 123 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 PRDX2P32119 198 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 GABRA2P47869 451 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 RPS25P62851 125 aaKnown RBP11.01□□□□□ -0.65
CKAP2-202ENST00000378034 HSD17B12Q53GQ0 312 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 SPIN3Q5JUX0 258 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 DCAF12L2Q5VW00 463 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 ASCL4Q6XD76 172 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 RNF144BQ7Z419 303 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 ZNF561Q8N587 486 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 TEX29Q8N6K0 151 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 OR5D18Q8NGL1 313 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 EMG1Q92979 244 aaKnown RBP11.01□□□□□ -0.65
CKAP2-202ENST00000378034 TMEM203Q969S6 136 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 DMRTB1Q96MA1 342 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 GLS2Q9UI32 602 aa11.01□□□□□ -0.65
CKAP2-202ENST00000378034 DOCK11Q5JSL3 2073 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 LOC105371242A0A075B767 164 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 A0A087WXM4 84 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 IGKV1-12A0A0C4DH73 117 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 F8VVB4 439 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 F8VWA3 439 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 CCRL2O00421 344 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 ANGPTL7O43827 346 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 IGKV1D-12P01611 117 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 HNF1AP20823 631 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 PTGFRP43088 359 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 NPBWR2P48146 333 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 CAV3P56539 151 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 PAX2Q02962 417 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 SSX1Q16384 188 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 ELP2Q6IA86 826 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 TMEM91Q6ZNR0 172 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 FAM216BQ8N7L0 139 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 TSPAN14Q8NG11 270 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 TNFAIP8L1Q8WVP5 186 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 RAB40AQ8WXH6 277 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 SLITRK2Q9H156 845 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 ZNF696Q9H7X3 374 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 HMG20AQ9NP66 347 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 CDC42EP3Q9UKI2 254 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 INSIG2Q9Y5U4 225 aa11□□□□□ -0.65
CKAP2-202ENST00000378034 IGHV2-70DA0A0C4DH43 119 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 INAFM1C9JVW0 142 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 ENSAO43768 121 aaKnown RBP10.99□□□□□ -0.65
CKAP2-202ENST00000378034 MAS1P04201 325 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 LIPFP07098 398 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 CHRM2P08172 466 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 SRMP19623 302 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 PSMB9P28065 219 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 MTNR1BP49286 362 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 INSL4Q14641 139 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 ZNF146Q15072 292 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 CR1LQ2VPA4 569 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 SYT6Q5T7P8 510 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-202ENST00000378034 BTNL3Q6UXE8 466 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 CD177Q8N6Q3 437 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 Q8NFD4 153 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 DACT3Q96B18 629 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-202ENST00000378034 FOXRED1Q96CU9 486 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-202ENST00000378034 UQCC2Q9BRT2 126 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 FAM234AQ9H0X4 552 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 VCX3AQ9NNX9 186 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 PCDHB16Q9NRJ7 776 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 RBFOX1Q9NWB1 397 aaKnown RBP10.99□□□□□ -0.65
CKAP2-202ENST00000378034 IL36GQ9NZH8 169 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 MAB21L2Q9Y586 359 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 NSD1Q96L73 2696 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-202ENST00000378034 KIR2DS1A0A191URI9 304 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 ZNF780AO75290 641 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-202ENST00000378034 INMTO95050 263 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 PRKACAP17612 351 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 GP2P55259 537 aaKnown RBP10.99□□□□□ -0.65
CKAP2-202ENST00000378034 FABP5Q01469 135 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 DGUOKQ16854 277 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 FAM120AOSQ5T036 256 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 FAHD2BQ6P2I3 314 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-202ENST00000378034 CD200R1LQ6Q8B3 271 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 BATF2Q8N1L9 274 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 ST8SIA4Q92187 359 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 FAHD2AQ96GK7 314 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 NR1H4Q96RI1 486 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-202ENST00000378034 S100A13Q99584 98 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 SHARPINQ9H0F6 387 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 METTL9Q9H1A3 318 aa10.99□□□□□ -0.65
CKAP2-202ENST00000378034 MMP26Q9NRE1 261 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms