RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 COL10A1Q03692 680 aa17.08■□□□□ 0.32
VSX1-201ENST00000376707 HERPUD1Q15011 391 aa17.08■□□□□ 0.32
VSX1-201ENST00000376707 C11orf88Q6PI97 169 aa17.08■□□□□ 0.32
VSX1-201ENST00000376707 CCDC121Q6ZUS5 278 aa17.08■□□□□ 0.32
VSX1-201ENST00000376707 OR2T6Q8NHC8 308 aa17.08■□□□□ 0.32
VSX1-201ENST00000376707 CEP19Q96LK0 163 aa17.08■□□□□ 0.32
VSX1-201ENST00000376707 CHST5Q9GZS9 411 aa17.08■□□□□ 0.32
VSX1-201ENST00000376707 RANBP3Q9H6Z4 567 aaPredicted RBP17.08■□□□□ 0.32
VSX1-201ENST00000376707 CMYA5Q8N3K9 4069 aa17.08■□□□□ 0.32
VSX1-201ENST00000376707 K7N7A8 449 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 ENTPD6O75354 484 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 GATBO75879 557 aaKnown RBP17.07■□□□□ 0.32
VSX1-201ENST00000376707 CHRM2P08172 466 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 EFNB2P52799 333 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 EDDM3BP56851 147 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 ACTC1P68032 377 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 ACTA1P68133 377 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 UBE2V2Q15819 145 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 MEDAGQ5VYS4 303 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 LIAT1Q6ZQX7 453 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 FAM220AQ7Z4H9 259 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 C10orf35Q96D05 121 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 NPFFR1Q9GZQ6 430 aa17.07■□□□□ 0.32
VSX1-201ENST00000376707 INMTO95050 263 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 SERPINA3P01011 423 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 UBCP0CG48 685 aaKnown RBP17.06■□□□□ 0.32
VSX1-201ENST00000376707 KIR3DL2P43630 455 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 FUT6P51993 359 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 TP53I3Q53FA7 332 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 CRIP3Q6Q6R5 217 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 GDPD3Q7L5L3 318 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 KCTD20Q7Z5Y7 419 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 LHFPL4Q7Z7J7 247 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 C10orf67Q8IYJ2 551 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 DTX3Q8N9I9 347 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 OR13D1Q8NGV5 346 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 SLAMF9Q96A28 289 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 NKX3-1Q99801 234 aaPredicted RBP17.06■□□□□ 0.32
VSX1-201ENST00000376707 MTCH1Q9NZJ7 389 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 GNG8Q9UK08 70 aa17.06■□□□□ 0.32
VSX1-201ENST00000376707 LOC107986453A0A1B0GWG9 222 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 C17orf98A8MV24 154 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 DLX6P56179 175 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 PLA1AQ53H76 456 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 FDX2Q6P4F2 183 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 C1QL4Q86Z23 238 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 CBR4Q8N4T8 237 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 KLHDC1Q8N7A1 406 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 RNFT2Q96EX2 444 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 BORCS8Q96FH0 119 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 FOXJ3Q9UPW0 622 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 NOTCH1P46531 2555 aa17.05■□□□□ 0.32
VSX1-201ENST00000376707 IGKV1-27A0A075B6S5 117 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 MEX3AA1L020 520 aaKnown RBP17.04■□□□□ 0.32
VSX1-201ENST00000376707 FAM90A8PA6NJQ4 464 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 F8VVB4 439 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 F8VWA3 439 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 CHST1O43916 411 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 ZNF737O75373 536 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 ARG1P05089 322 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 ISG15P05161 165 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 ZNF728P0DKX0 622 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 CNN3Q15417 329 aaKnown RBP17.04■□□□□ 0.32
VSX1-201ENST00000376707 ZIK1Q3SY52 487 aaPredicted RBP17.04■□□□□ 0.32
VSX1-201ENST00000376707 SLC25A26Q70HW3 274 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 EGFL6Q8IUX8 553 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 OR8H2Q8N162 312 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 C11orf44Q8N8P7 122 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 OR2G2Q8NGZ5 317 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 PIFOQ8TCI5 191 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 PP6455Q8WZ26 134 aa17.04■□□□□ 0.32
VSX1-201ENST00000376707 FOXRED1Q96CU9 486 aaPredicted RBP17.04■□□□□ 0.32
VSX1-201ENST00000376707 TBL2Q9Y4P3 447 aaKnown RBP17.04■□□□□ 0.32
VSX1-201ENST00000376707 SNTNA6NMZ2 147 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 SLC16A6O15403 523 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 RBP4P02753 201 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 GABRB1P18505 474 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 EDDM3AQ14507 147 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 FAM189A2Q15884 450 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 TMEM244Q5VVB8 128 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 RDH10Q8IZV5 341 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 EMG1Q92979 244 aaKnown RBP17.03■□□□□ 0.32
VSX1-201ENST00000376707 SNX22Q96L94 193 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 MBOAT4Q96T53 435 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 ABCB10Q9NRK6 738 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 FRRS1LQ9P0K9 344 aa17.03■□□□□ 0.32
VSX1-201ENST00000376707 EXOGQ9Y2C4 368 aaKnown RBP17.03■□□□□ 0.32
VSX1-201ENST00000376707 DAPL1A0PJW8 107 aa17.02■□□□□ 0.32
VSX1-201ENST00000376707 VGLL3A8MV65 326 aa17.02■□□□□ 0.32
VSX1-201ENST00000376707 IGHV1-8P0DP01 117 aa17.02■□□□□ 0.32
VSX1-201ENST00000376707 VSIG10L2P0DP72 767 aa17.02■□□□□ 0.32
VSX1-201ENST00000376707 OR12D2P58182 307 aa17.02■□□□□ 0.32
VSX1-201ENST00000376707 NANOS3P60323 173 aaKnown RBP17.02■□□□□ 0.32
VSX1-201ENST00000376707 DYNC1I2Q13409 638 aaKnown RBP17.02■□□□□ 0.32
VSX1-201ENST00000376707 Q8IYB0 196 aa17.02■□□□□ 0.32
VSX1-201ENST00000376707 DYNAPQ8N1N2 210 aa17.02■□□□□ 0.32
VSX1-201ENST00000376707 ACBD7Q8N6N7 88 aa17.02■□□□□ 0.32
VSX1-201ENST00000376707 DNAAF1Q8NEP3 725 aa17.02■□□□□ 0.32
VSX1-201ENST00000376707 MALSU1Q96EH3 234 aa17.02■□□□□ 0.32
VSX1-201ENST00000376707 ZNF714Q96N38 554 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms