RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 TMEM70Q9BUB7 260 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 OR51B4Q9Y5P0 310 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 SLC17A2O00624 439 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 TCTN1Q2MV58 587 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 TXNRD2Q9NNW7 524 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 TMEM38BQ9NVV0 291 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 SPTBN1Q01082 2364 aaKnown RBP10.45□□□□□ -0.74
VPS13A-205ENST00000376636 H7C2G1 150 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 ORM2P19652 201 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 PLSCR3Q9NRY6 295 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 MIOXQ9UGB7 285 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 PIK3C2AO00443 1686 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 C3orf85A0A1B0GTC6 90 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 OR2W5A6NFC9 320 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 GNG3P63215 75 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 AESQ08117 197 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 NHLRC1Q6VVB1 395 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 CCDC190Q86UF4 302 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 VCX2Q9H322 139 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 KLK11Q9UBX7 282 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 DNLZQ5SXM8 178 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 NUFIP2Q7Z417 695 aaKnown RBP10.45□□□□□ -0.74
VPS13A-205ENST00000376636 CALHM1Q8IU99 346 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 FBXL14Q8N1E6 418 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 PHOSPHO2Q8TCD6 241 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 PLPP1O14494 284 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 MGPP08493 103 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 SDF2Q99470 211 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 C19orf53Q9UNZ5 99 aaPredicted RBP10.45□□□□□ -0.74
VPS13A-205ENST00000376636 RAXQ9Y2V3 346 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 HS3ST3A1Q9Y663 406 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 TJP1Q07157 1748 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 DHRS2Q13268 280 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 MRM1Q6IN84 353 aaKnown RBP10.44□□□□□ -0.74
VPS13A-205ENST00000376636 RNF165Q6ZSG1 346 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 NOXO1Q8NFA2 376 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 OR8D4Q8NGM9 314 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 OR4S2Q8NH73 311 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 DHCR7Q9UBM7 475 aaKnown RBP10.44□□□□□ -0.74
VPS13A-205ENST00000376636 PRSS50Q9UI38 385 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 LNP1A1A4G5 178 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 B4GALT3O60512 393 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 NDUFB6O95139 128 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 Q7L0L9 218 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 RASL11BQ9BPW5 248 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 CACNG5Q9UF02 275 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 TMEM189-UBE2V1I3L0A0 370 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 SIT1Q9Y3P8 196 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 CXorf1O96002 111 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 FAHD2BQ6P2I3 314 aaPredicted RBP10.44□□□□□ -0.74
VPS13A-205ENST00000376636 FAM169BQ8N8A8 192 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 FADS6Q8N9I5 356 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 NUDT10Q8NFP7 164 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 ZNF502Q8TBZ5 544 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 NUDT11Q96G61 164 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 C1QTNF6Q9BXI9 259 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 CES1P1Q9UKY3 287 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 ZNF324O75467 553 aaPredicted RBP10.44□□□□□ -0.74
VPS13A-205ENST00000376636 DLK1P80370 383 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 TTC9BQ8N6N2 239 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 OR2Z1Q8NG97 314 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 CDX2Q99626 313 aaPredicted RBP10.44□□□□□ -0.74
VPS13A-205ENST00000376636 CA10Q9NS85 328 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 NALCNQ8IZF0 1738 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 CBR3O75828 277 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 ID1P41134 155 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 PARM1Q6UWI2 310 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 BVESQ8NE79 360 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 HIST1H4GQ99525 98 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 RNF167Q9H6Y7 350 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 YLPM1P49750 1951 aaKnown RBP10.44□□□□□ -0.74
VPS13A-205ENST00000376636 PFN3P60673 137 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 AWAT1Q58HT5 328 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 TMEM136Q6ZRR5 245 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 OR2W1Q9Y3N9 320 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 OR2C3Q8N628 320 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 HCFC1R1Q9NWW0 138 aa10.44□□□□□ -0.74
VPS13A-205ENST00000376636 ATF1P18846 271 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 FUT7Q11130 342 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 C20orf196Q8IYI0 205 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 SPPL3Q8TCT6 385 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 HINT3Q9NQE9 182 aaKnown RBP10.43□□□□□ -0.74
VPS13A-205ENST00000376636 MPC2O95563 127 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 IL24Q13007 206 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 GSG1Q2KHT4 349 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 TMPRSS13Q9BYE2 586 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 MCM3APO60318 1980 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 PCBP3P57721 371 aaKnown RBP10.43□□□□□ -0.74
VPS13A-205ENST00000376636 TWIST1Q15672 202 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 SMCHD1A6NHR9 2005 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 SMIM18P0DKX4 95 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 DUSP2Q05923 314 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 SLC16A13Q7RTY0 426 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 AKIP1Q9NQ31 210 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 RAB29O14966 203 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 SLC39A5Q6ZMH5 540 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 BTLAQ7Z6A9 289 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 KDM3BQ7LBC6 1761 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 B4GALT1P15291 398 aa10.43□□□□□ -0.74
VPS13A-205ENST00000376636 PNLIPRP2P54317 469 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms