RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 LIME1Q9H400 295 aa19.29■□□□□ 0.68
HLA-C-202ENST00000376237 ST3GAL6Q9Y274 331 aa19.29■□□□□ 0.68
HLA-C-202ENST00000376237 DCHS2Q6V1P9 2916 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 CYB5R3P00387 301 aaPredicted RBP19.28■□□□□ 0.68
HLA-C-202ENST00000376237 CHRM2P08172 466 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 PAX1P15863 534 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 CPT2P23786 658 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 SPIN3Q5JUX0 258 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 ACP7Q6ZNF0 438 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 LINC00596Q86U02 117 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 SLC25A38Q96DW6 304 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 Q96M66 194 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 LPAR5Q9H1C0 372 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 BARX1Q9HBU1 254 aaPredicted RBP19.28■□□□□ 0.68
HLA-C-202ENST00000376237 MYOZ1Q9NP98 299 aaPredicted RBP19.28■□□□□ 0.68
HLA-C-202ENST00000376237 CACNG2Q9Y698 323 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 CACNA1DQ01668 2161 aa19.28■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A10PA6NDY2 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A18PA6NE21 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A16PA6NEW6 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A20PA6NIJ5 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A8PA6NJQ4 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A7PA6NKC0 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A22PA8MWA6 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A12PA8MX19 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A5PA8MXJ8 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A23PA8MXZ1 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 H3BUI4 141 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A15PP0C7V4 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A13PP0C7W8 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A14PP0C7W9 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM90A24PP0C7X0 464 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 COL8A2P25067 703 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 EFNB2P52799 333 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 RBM11P57052 281 aaKnown RBP19.27■□□□□ 0.68
HLA-C-202ENST00000376237 IL13RA2Q14627 380 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 RAB12Q6IQ22 244 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 BATF2Q8N1L9 274 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 FAM89BQ8N5H3 189 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 OR6Q1Q8NGQ2 317 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 PHF21AQ96BD5 680 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 WDFY2Q96P53 400 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 ATG5Q9H1Y0 275 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 WDR13Q9H1Z4 485 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 MIXL1Q9H2W2 232 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 GLS2Q9UI32 602 aa19.27■□□□□ 0.68
HLA-C-202ENST00000376237 A0A0A6YYH2 397 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 A6NJ64 397 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 WNT9BO14905 357 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 RP2O75695 350 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 FSTL3O95633 263 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 KNG1P01042 644 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 MUC1P15941 1255 aaPredicted RBP19.26■□□□□ 0.67
HLA-C-202ENST00000376237 ELK1P19419 428 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 KRTAP10-9P60411 292 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 PLA2G7Q13093 441 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 ZNF146Q15072 292 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 PEG10Q86TG7 708 aaKnown RBP19.26■□□□□ 0.67
HLA-C-202ENST00000376237 TGIF2LYQ8IUE0 185 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 LAX1Q8IWV1 398 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 CMTM4Q8IZR5 234 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 OR56B1Q8NGI3 324 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 YIPF5Q969M3 257 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 CHODLQ9H9P2 273 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 SEBOXQ9HB31 216 aaPredicted RBP19.26■□□□□ 0.67
HLA-C-202ENST00000376237 DIABLOQ9NR28 239 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 DNAJB11Q9UBS4 358 aa19.26■□□□□ 0.67
HLA-C-202ENST00000376237 PPIAL4EA0A075B759 164 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 FAM25AB3EWG3 89 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 FAM25CB3EWG5 89 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 FAM25GB3EWG6 89 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 PPIAL4DF5H284 164 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.25■□□□□ 0.67
HLA-C-202ENST00000376237 PPIAL4FP0DN26 164 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 EGR1P18146 543 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 TALDO1P37837 337 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 PITPNBP48739 271 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 TMEM33P57088 247 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 GMFBP60983 142 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 MICBQ29980 383 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 MPV17LQ2QL34 196 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 TEX36Q5VZQ5 186 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 BOLLQ8N9W6 283 aaKnown RBP19.25■□□□□ 0.67
HLA-C-202ENST00000376237 NRGNQ92686 78 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 NLKQ9UBE8 527 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 PPIAL4AQ9Y536 164 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 TRAV38-1A0A0B4J264 116 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 CLDN25C9JDP6 229 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 NDUFS7O75251 213 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 EIF4EP06730 217 aaKnown RBP19.25■□□□□ 0.67
HLA-C-202ENST00000376237 TNFSF8P32971 234 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 TAF9Q16594 264 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 PIGYQ3MUY2 71 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 NUDT16L1Q9BRJ7 211 aaKnown RBP19.25■□□□□ 0.67
HLA-C-202ENST00000376237 GSX2Q9BZM3 304 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 DCAF16Q9NXF7 216 aa19.25■□□□□ 0.67
HLA-C-202ENST00000376237 LRBAP50851 2863 aa19.24■□□□□ 0.67
HLA-C-202ENST00000376237 CHD3Q12873 2000 aaKnown RBP19.24■□□□□ 0.67
HLA-C-202ENST00000376237 OOEPA6NGQ2 149 aa19.24■□□□□ 0.67
HLA-C-202ENST00000376237 LGALS8O00214 317 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms