RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 NSG2Q9Y328 171 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 POMT1Q9Y6A1 747 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 C9J4A7 227 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 CRYBA1P05813 215 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 OR8U9P0C7N5 309 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 ZNF32P17041 273 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 CARD18P57730 90 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 PIGYQ3MUY2 71 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 ZNF468Q5VIY5 522 aaPredicted RBP12.64□□□□□ -0.39
MSH5-201ENST00000375703 ASCL4Q6XD76 172 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 YRDCQ86U90 279 aaKnown RBP12.64□□□□□ -0.39
MSH5-201ENST00000375703 AGBL5Q8NDL9 886 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 OR10AD1Q8NGE0 317 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 OR8U1Q8NH10 309 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 RXFP4Q8TDU9 374 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 GALNT14Q96FL9 552 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 BCO1Q9HAY6 547 aa12.64□□□□□ -0.39
MSH5-201ENST00000375703 NSG1A0A0A6YYJ2 146 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 GLI4P10075 376 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 MLF1P58340 268 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 ZNF528Q3MIS6 628 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 PHLDA2Q53GA4 152 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 AVPI1Q5T686 147 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 TSPO2Q5TGU0 170 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 SLC22A25Q6T423 547 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 OSR2Q8N2R0 312 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 GLYATL2Q8WU03 294 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 MARS2Q96GW9 593 aaKnown RBP12.63□□□□□ -0.39
MSH5-201ENST00000375703 BIN3Q9NQY0 253 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 FAM212BQ9NTI7 297 aaPredicted RBP12.63□□□□□ -0.39
MSH5-201ENST00000375703 TMEM38BQ9NVV0 291 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 CFAP54Q96N23 3096 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 IGKV1-12A0A0C4DH73 117 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 DIRAS3O95661 229 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 IGKV1D-12P01611 117 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 CCL4P13236 92 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 B4GALT1P15291 398 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 HTR5AP47898 357 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 FBXL14Q8N1E6 418 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 CPT1CQ8TCG5 803 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 BSCL2Q96G97 398 aaPredicted RBP12.63□□□□□ -0.39
MSH5-201ENST00000375703 AKR1E2Q96JD6 320 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 SUCNR1Q9BXA5 334 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 ST3GAL6Q9Y274 331 aa12.63□□□□□ -0.39
MSH5-201ENST00000375703 WDR87Q6ZQQ6 2873 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 MEX3AA1L020 520 aaKnown RBP12.62□□□□□ -0.39
MSH5-201ENST00000375703 CCDC85CA6NKD9 419 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 TERTO14746 1132 aaKnown RBP12.62□□□□□ -0.39
MSH5-201ENST00000375703 AAED1Q7RTV5 226 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 LYPD6BQ8NI32 183 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 SYT3Q9BQG1 590 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 SIT1Q9Y3P8 196 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 DNPH1O43598 174 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 TSPAN15O95858 294 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 PSG4Q00888 419 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 PDCD1Q15116 288 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 AKIRIN2Q53H80 203 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 TMEM42Q69YG0 159 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 LIAT1Q6ZQX7 453 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 OR5L1Q8NGL2 311 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 OR14L1PQ8NHC6 308 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 SLC2A9Q9NRM0 540 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 SLC7A11Q9UPY5 501 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 TIMM10BQ9Y5J6 103 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 CACNA1EQ15878 2313 aa12.62□□□□□ -0.39
MSH5-201ENST00000375703 BORCS7-ASMTA0A0B4J1R7 106 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 OR6C6A6NF89 314 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 H7C1Q1 480 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 SPP1P10451 314 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 FUT6P51993 359 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 B3GALT5-AS1P59052 145 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 SKA3Q8IX90 412 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 OR2Y1Q8NGV0 311 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 SECTM1Q8WVN6 248 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 PIGCQ92535 297 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 C18orf12Q96KH6 178 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 ALKBH3Q96Q83 286 aaPredicted RBP12.61□□□□□ -0.39
MSH5-201ENST00000375703 ARV1Q9H2C2 271 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 ZNF286AQ9HBT8 521 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 FAM157AC9JC47 383 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 XRCC2O43543 280 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 GPR137BO60478 399 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 LGI3Q8N145 548 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 LRTM2Q8N967 370 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 WFDC1Q9HC57 220 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 SMCO4Q9NRQ5 59 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 PILRBQ9UKJ0 227 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 ARID1AO14497 2285 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 WDFY3Q8IZQ1 3526 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 ZNF98A6NK75 572 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 COLCA2A8K830 154 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 CXCL13O43927 109 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 P04436 131 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 SEC11BP0C7V7 166 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 TCN2P20062 427 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 DUSP1P28562 367 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 SRD5A2P31213 254 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 ZNF92Q03936 586 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 MALLQ13021 153 aa12.61□□□□□ -0.39
MSH5-201ENST00000375703 GPR157Q5UAW9 335 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms