RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 DPPA3Q6W0C5 159 aa16.06■□□□□ 0.16
MMP9-201ENST00000372330 GALNTL5Q7Z4T8 443 aa16.06■□□□□ 0.16
MMP9-201ENST00000372330 ZFP62Q8NB50 900 aaPredicted RBP16.06■□□□□ 0.16
MMP9-201ENST00000372330 OR13H1Q8NG92 308 aa16.06■□□□□ 0.16
MMP9-201ENST00000372330 MRGPRX4Q96LA9 322 aa16.06■□□□□ 0.16
MMP9-201ENST00000372330 STARD5Q9NSY2 213 aa16.06■□□□□ 0.16
MMP9-201ENST00000372330 HEATR5AQ86XA9 2040 aa16.06■□□□□ 0.16
MMP9-201ENST00000372330 P2RY10O00398 339 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 MPIG6BO95866 241 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 SLC35E2P0CK97 266 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 ZNF43P17038 809 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 RPL29P47914 159 aaKnown RBP16.05■□□□□ 0.16
MMP9-201ENST00000372330 RPP30P78346 268 aaKnown RBP16.05■□□□□ 0.16
MMP9-201ENST00000372330 SQSTM1Q13501 440 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 RTN4RL2Q86UN3 420 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 SLC22A18ASQ8N1D0 253 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 SLC37A2Q8TED4 501 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 GNPNAT1Q96EK6 184 aaPredicted RBP16.05■□□□□ 0.16
MMP9-201ENST00000372330 URM1Q9BTM9 101 aaKnown RBP16.05■□□□□ 0.16
MMP9-201ENST00000372330 HS3ST3A1Q9Y663 406 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 ITGB1BP1O14713 200 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 RAD51DO75771 328 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 MMP7P09237 267 aaPredicted RBP16.05■□□□□ 0.16
MMP9-201ENST00000372330 OR10J1P30954 320 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 GALNSP34059 522 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 SFTPDP35247 375 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 LTBRP36941 435 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 PPP1CAP62136 330 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 GNMTQ14749 295 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 DGAT2L6Q6ZPD8 337 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 FBXL14Q8N1E6 418 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 RELTQ969Z4 430 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 CCDC3Q9BQI4 270 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 TMEM59Q9BXS4 323 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 GAL3ST2Q9H3Q3 398 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 DECR2Q9NUI1 292 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 SEMA5BQ9P283 1151 aa16.05■□□□□ 0.16
MMP9-201ENST00000372330 KIR2DS5A0A0G2JLQ3 304 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 A0A0G2JNG1 304 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 TCRBV21S2A2A0A5A6 115 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 KIR2DS3K7RE56 304 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 HCRTR1O43613 425 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 DUSP1P28562 367 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 KIR2DS5Q14953 304 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 ARL6IP1Q15041 203 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 OTPQ5XKR4 325 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 GLIPR1L1Q6UWM5 242 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 LRTM2Q8N967 370 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 ARHGAP5-AS1Q96IT6 56 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 PCED1AQ9H1Q7 454 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 LPAR2Q9HBW0 351 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 FKBP11Q9NYL4 201 aa16.04■□□□□ 0.16
MMP9-201ENST00000372330 MRPS28Q9Y2Q9 187 aaKnown RBP16.04■□□□□ 0.16
MMP9-201ENST00000372330 ETV2O00321 342 aaPredicted RBP16.03■□□□□ 0.16
MMP9-201ENST00000372330 FOXS1O43638 330 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 RPL27P61353 136 aaKnown RBP16.03■□□□□ 0.16
MMP9-201ENST00000372330 PMS2P11Q13670 270 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 FBXW9Q5XUX1 488 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 OR4C3Q8NH37 302 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 HLA-CQ95604 372 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 VSTM2LQ96N03 204 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 SDF2L1Q9HCN8 221 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 LRP4O75096 1905 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 XRCC2O43543 280 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 SEMA4FO95754 770 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 BGLAPP02818 100 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 CELA2BP08218 269 aaPredicted RBP16.03■□□□□ 0.16
MMP9-201ENST00000372330 GABRG2P18507 467 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 CD82P27701 267 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 BRS3P32247 399 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 EWSR1Q01844 656 aaKnown RBP eCLIP16.03■□□□□ 0.16
MMP9-201ENST00000372330 AARDQ4LEZ3 155 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 NCR3LG1Q68D85 454 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 ZNF66Q6ZN08 573 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 ZNF705AQ6ZN79 300 aaPredicted RBP16.03■□□□□ 0.16
MMP9-201ENST00000372330 OOSP2Q86WS3 158 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 TMEM170AQ8WVE7 144 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 FOXN4Q96NZ1 517 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 FAM60AQ9NP50 221 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 PARD6AQ9NPB6 346 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 LRIT1Q9P2V4 623 aa16.03■□□□□ 0.16
MMP9-201ENST00000372330 TRAV1-1A0A0B4J248 108 aa16.02■□□□□ 0.16
MMP9-201ENST00000372330 LOC102723971A0A1B0GUV8 181 aa16.02■□□□□ 0.16
MMP9-201ENST00000372330 A6NNC1 897 aa16.02■□□□□ 0.16
MMP9-201ENST00000372330 ZNF732B4DXR9 585 aa16.02■□□□□ 0.16
MMP9-201ENST00000372330 RRP8O43159 456 aaKnown RBP16.02■□□□□ 0.16
MMP9-201ENST00000372330 DIRAS3O95661 229 aa16.02■□□□□ 0.16
MMP9-201ENST00000372330 SCGB1D1O95968 90 aa16.02■□□□□ 0.16
MMP9-201ENST00000372330 ACOT6Q3I5F7 207 aaPredicted RBP16.02■□□□□ 0.16
MMP9-201ENST00000372330 ZNF542PQ5EBM4 170 aa16.02■□□□□ 0.16
MMP9-201ENST00000372330 FAM90A2PQ658T7 463 aa16.02■□□□□ 0.16
MMP9-201ENST00000372330 FBXW12Q6X9E4 464 aa16.02■□□□□ 0.16
MMP9-201ENST00000372330 MAML2Q8IZL2 1156 aaPredicted RBP16.02■□□□□ 0.16
MMP9-201ENST00000372330 BOD1Q96IK1 185 aa16.02■□□□□ 0.16
MMP9-201ENST00000372330 ABHD14AQ9BUJ0 271 aa16.02■□□□□ 0.16
MMP9-201ENST00000372330 PITX3O75364 302 aa16.02■□□□□ 0.15
MMP9-201ENST00000372330 CTSBP07858 339 aa16.02■□□□□ 0.15
MMP9-201ENST00000372330 FAM3BP58499 235 aaPredicted RBP16.02■□□□□ 0.15
MMP9-201ENST00000372330 RTL6Q6ICC9 239 aa16.02■□□□□ 0.15
MMP9-201ENST00000372330 ZNF880Q6PDB4 577 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms