RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 APH1BQ8WW43 257 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 NDFIP1Q9BT67 221 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 SAV1Q9H4B6 383 aaPredicted RBP12.99□□□□□ -0.33
NDC1-201ENST00000371429 OR5V1Q9UGF6 321 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 BOLA1Q9Y3E2 137 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 A0A1B0GUH1 482 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 NUDT19A8MXV4 375 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 CRYZL1O95825 349 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 PTHLHP12272 177 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 LIMK1P53667 647 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 SP6Q3SY56 376 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 LRRTM1Q86UE6 522 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 MDP1Q86V88 176 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 CDH26Q8IXH8 852 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 LHX4Q969G2 390 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 ACTR3CQ9C0K3 210 aaPredicted RBP12.99□□□□□ -0.33
NDC1-201ENST00000371429 COX5AP20674 150 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 GLCCI1Q86VQ1 547 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 ARFGEF1Q9Y6D6 1849 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 ZNF883P0CG24 379 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 COX6B1P14854 86 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 BRS3P32247 399 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 ACAA2P42765 397 aaKnown RBP12.98□□□□□ -0.33
NDC1-201ENST00000371429 P2RY6Q15077 328 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 LINC00303Q3SY05 128 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 ATP1A1-AS1Q5TC04 95 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 C19orf48Q6RUI8 117 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 ZCCHC14Q8WYQ9 949 aaKnown RBP12.98□□□□□ -0.33
NDC1-201ENST00000371429 SOX7Q9BT81 388 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 CENPVL1A0A0U1RR11 272 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 BTF3L4Q96K17 158 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 ADGRG7Q96K78 797 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 SMCO4Q9NRQ5 59 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 TNFRSF19Q9NS68 423 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 TDRD6O60522 2096 aaKnown RBP12.98□□□□□ -0.33
NDC1-201ENST00000371429 SH2D7A6NKC9 451 aaPredicted RBP12.98□□□□□ -0.33
NDC1-201ENST00000371429 ZNF724A8MTY0 619 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 PRR33A8MZF0 331 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 M6PRP20645 277 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 SLC7A5P1Q8MH63 180 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 SRRQ9GZT4 340 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 MSL2Q9HCI7 577 aa12.98□□□□□ -0.33
NDC1-201ENST00000371429 A0A0A6YYJ9 748 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 COX7A2P2O60397 106 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 TRAPPC2P0DI81 140 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 TRAPPC2BP0DI82 140 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 ZNF770Q6IQ21 691 aaPredicted RBP12.97□□□□□ -0.33
NDC1-201ENST00000371429 BARX1Q9HBU1 254 aaPredicted RBP12.97□□□□□ -0.33
NDC1-201ENST00000371429 FAM157AC9JC47 383 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 TSPAN2O60636 221 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 MBP02144 154 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 AARDQ4LEZ3 155 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 C10orf111Q8N326 155 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 SCARF2Q96GP6 870 aaPredicted RBP12.97□□□□□ -0.33
NDC1-201ENST00000371429 PRR19A6NJB7 356 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 RSPO4Q2I0M5 234 aaPredicted RBP12.97□□□□□ -0.33
NDC1-201ENST00000371429 Q56UQ5 140 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 KDF1Q8NAX2 398 aaPredicted RBP12.97□□□□□ -0.33
NDC1-201ENST00000371429 TMED6Q8WW62 240 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 OR2D2Q9H210 308 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 ACACAQ13085 2346 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 UPK3AO75631 287 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 CEACAM1P13688 526 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 FPR2P25090 351 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 CRYBB2P43320 205 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 BAK1Q16611 211 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 CTF1Q16619 201 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 Q6ZNX1 250 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
NDC1-201ENST00000371429 CACNA1IQ9P0X4 2223 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 GOSR1O95249 250 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 LPAR6P43657 344 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 COL19A1Q14993 1142 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 HEXA-AS1Q9H8Q6 139 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 ABCA7Q8IZY2 2146 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 LALBAP00709 142 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 RBP4P02753 201 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 MT-ND4LP03901 98 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 BMI1P35226 326 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 INPP5JQ15735 1006 aaPredicted RBP12.96□□□□□ -0.33
NDC1-201ENST00000371429 OR10AC1Q8NH08 325 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 SCARB1Q8WTV0 552 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 C10orf35Q96D05 121 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 OPN3Q9H1Y3 402 aaPredicted RBP12.96□□□□□ -0.33
NDC1-201ENST00000371429 CLN8Q9UBY8 286 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 J3QT63 122 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 TXNL1O43396 289 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 CTAG2O75638 210 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 SLC25A6P12236 298 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 ID4P47928 161 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 SCAND1P57086 179 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 TMPRSS13Q9BYE2 586 aa12.96□□□□□ -0.33
NDC1-201ENST00000371429 NME2P1O60361 137 aa12.96□□□□□ -0.34
NDC1-201ENST00000371429 CYTIPO60759 359 aa12.96□□□□□ -0.34
NDC1-201ENST00000371429 OR13C7P0DN81 318 aa12.96□□□□□ -0.34
NDC1-201ENST00000371429 P2RX3P56373 397 aa12.96□□□□□ -0.34
NDC1-201ENST00000371429 CDCP2Q5VXM1 449 aa12.96□□□□□ -0.34
NDC1-201ENST00000371429 FAM122CQ6P4D5 195 aa12.96□□□□□ -0.34
NDC1-201ENST00000371429 GNG13Q9P2W3 67 aa12.96□□□□□ -0.34
NDC1-201ENST00000371429 ZNF835Q9Y2P0 537 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms