RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ZNF561Q8N587 486 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 JAGN1Q8N5M9 183 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 PXT1Q8NFP0 134 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 OR52N4Q8NGI2 321 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 OR51A2Q8NGJ7 313 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 OR5D18Q8NGL1 313 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 ANGPTL6Q8NI99 470 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 FOXRED1Q96CU9 486 aaPredicted RBP11.48□□□□□ -0.57
SSR4-202ENST00000370085 ZNF488Q96MN9 340 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 NR1H4Q96RI1 486 aaPredicted RBP11.48□□□□□ -0.57
SSR4-202ENST00000370085 CCL13Q99616 98 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 HES4Q9HCC6 221 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 TMEM160Q9NX00 188 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 NDUFB11Q9NX14 153 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 MTCH1Q9NZJ7 389 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 LPAR3Q9UBY5 353 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 OR14J1Q9UGF5 321 aa11.48□□□□□ -0.57
SSR4-202ENST00000370085 POLR3KQ9Y2Y1 108 aaPredicted RBP11.48□□□□□ -0.57
SSR4-202ENST00000370085 LOC105371242A0A075B767 164 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 RFPL4AA6NLU0 287 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 RFPL4AL1F8VTS6 287 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 DVL1O14640 695 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 SIGLEC5O15389 551 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 PHF1O43189 567 aaPredicted RBP11.47□□□□□ -0.57
SSR4-202ENST00000370085 CSTBP04080 98 aaKnown RBP11.47□□□□□ -0.57
SSR4-202ENST00000370085 PRKACAP17612 351 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 SRMP19623 302 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 PRDX2P32119 198 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 PTGFRP43088 359 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 MTNR1BP49286 362 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 CAPZA1P52907 286 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 RPS25P62851 125 aaKnown RBP11.47□□□□□ -0.57
SSR4-202ENST00000370085 HOXA4Q00056 320 aaPredicted RBP11.47□□□□□ -0.57
SSR4-202ENST00000370085 KRTAP1-1Q07627 177 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 SPIN3Q5JUX0 258 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 ZNF788Q6ZQV5 615 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 Q71RC1 249 aaPredicted RBP11.47□□□□□ -0.57
SSR4-202ENST00000370085 ST8SIA4Q92187 359 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 SEH1LQ96EE3 360 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 UQCC2Q9BRT2 126 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 MRI1Q9BV20 369 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 SHARPINQ9H0F6 387 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 METTL9Q9H1A3 318 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 ZNF696Q9H7X3 374 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 CDC42EP3Q9UKI2 254 aa11.47□□□□□ -0.57
SSR4-202ENST00000370085 SONP18583 2426 aaKnown RBP11.47□□□□□ -0.57
SSR4-202ENST00000370085 TRAV8-7A0A075B6U6 113 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 GABRPO00591 440 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 SH2D1BO14796 132 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 TNFRSF13BO14836 293 aaPredicted RBP11.46□□□□□ -0.57
SSR4-202ENST00000370085 ENSAO43768 121 aaKnown RBP11.46□□□□□ -0.57
SSR4-202ENST00000370085 ANGPTL7O43827 346 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 SC5DO75845 299 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 KDM4BO94953 1096 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 LIPFP07098 398 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 CHRM2P08172 466 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 UCHL1P09936 223 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 BCL3P20749 454 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 MYL9P24844 172 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 PSMD7P51665 324 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 ZP1P60852 638 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 SEC61A1P61619 476 aaKnown RBP11.46□□□□□ -0.57
SSR4-202ENST00000370085 IKZF1Q13422 519 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 NEDD8Q15843 81 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 FAHD2BQ6P2I3 314 aaPredicted RBP11.46□□□□□ -0.57
SSR4-202ENST00000370085 TMEM185AQ8NFB2 350 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 PPP1R35Q8TAP8 253 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 ORAI1Q96D31 301 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 SDSLQ96GA7 329 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 FAHD2AQ96GK7 314 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 SEBOXQ9HB31 216 aaPredicted RBP11.46□□□□□ -0.57
SSR4-202ENST00000370085 HMG20AQ9NP66 347 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 SLC25A10Q9UBX3 287 aaPredicted RBP11.46□□□□□ -0.57
SSR4-202ENST00000370085 GSTK1Q9Y2Q3 226 aa11.46□□□□□ -0.57
SSR4-202ENST00000370085 IGKV1D-17A0A075B6S4 117 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 PDCD5O14737 125 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 NDUFB7P17568 137 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 ZFP36P26651 326 aaKnown RBP11.45□□□□□ -0.58
SSR4-202ENST00000370085 CALRP27797 417 aaKnown RBP11.45□□□□□ -0.58
SSR4-202ENST00000370085 NPBWR2P48146 333 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 CAV3P56539 151 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 SCGB2A2Q13296 93 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 ZNF146Q15072 292 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 TIMM50Q3ZCQ8 353 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 SYT6Q5T7P8 510 aaPredicted RBP11.45□□□□□ -0.58
SSR4-202ENST00000370085 ASPHD2Q6ICH7 369 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 ZNF841Q6ZN19 808 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 BATF2Q8N1L9 274 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 FAM216BQ8N7L0 139 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 ASCC1Q8N9N2 400 aaKnown RBP11.45□□□□□ -0.58
SSR4-202ENST00000370085 OR5D13Q8NGL4 314 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 TBC1D15Q8TC07 691 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 RAB40AQ8WXH6 277 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 DMRTB1Q96MA1 342 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 GAFA1Q96PS6 74 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 NUDT16L1Q9BRJ7 211 aaKnown RBP11.45□□□□□ -0.58
SSR4-202ENST00000370085 BEX2Q9BXY8 128 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 FAM234AQ9H0X4 552 aa11.45□□□□□ -0.58
SSR4-202ENST00000370085 EXOSC4Q9NPD3 245 aaKnown RBP11.45□□□□□ -0.58
SSR4-202ENST00000370085 RBFOX1Q9NWB1 397 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms