RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 FBRSQ9HAH7 460 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ALKBH4Q9NXW9 302 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 NSG2Q9Y328 171 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 HS3ST3B1Q9Y662 390 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 TRBV11-1A0A0K0K1C0 115 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 IFNA17P01571 189 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 HTR5AP47898 357 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 CSNK1A1P48729 337 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 OR2G3Q8NGZ4 309 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 HPSE2Q8WWQ2 592 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 TCEAL7Q9BRU2 100 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 RBM24Q9BX46 236 aaKnown RBP8.84□□□□□ -0.99
PTPRA-203ENST00000356147 GPR61Q9BZJ8 451 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 TUBD1Q9UJT1 453 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 KCNIP3Q9Y2W7 256 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 NSG1A0A0A6YYJ2 146 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 FOXI3A8MTJ6 420 aaPredicted RBP8.84□□□□□ -0.99
PTPRA-203ENST00000356147 H3BQ15 152 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 CTSDP07339 412 aaPredicted RBP8.84□□□□□ -0.99
PTPRA-203ENST00000356147 PAX6P26367 422 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 GPX4P36969 197 aaPredicted RBP8.84□□□□□ -0.99
PTPRA-203ENST00000356147 P2RY1P47900 373 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 ERVFRD-1P60508 538 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 HNF4GQ14541 408 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 SLC22A25Q6T423 547 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 HEPN1Q6WQI6 88 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 PHOSPHO2Q8TCD6 241 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 RHBDD1Q8TEB9 315 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 Q8WTZ3 238 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 S100PBPQ96BU1 408 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 METTL7AQ9H8H3 244 aa8.84□□□□□ -0.99
PTPRA-203ENST00000356147 A0A1W2PPC4 97 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 GEMIN2O14893 280 aaKnown RBP8.83□□□□□ -1
PTPRA-203ENST00000356147 SEC11BP0C7V7 166 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 CHATP28329 748 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 UBE2KP61086 200 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 TMEM187Q14656 261 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 HMGN3Q15651 99 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 ZNF574Q6ZN55 896 aaPredicted RBP8.83□□□□□ -1
PTPRA-203ENST00000356147 ST8SIA1Q92185 356 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 NTNG2Q96CW9 530 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 NUDT16L1Q9BRJ7 211 aaKnown RBP8.83□□□□□ -1
PTPRA-203ENST00000356147 NAA60Q9H7X0 242 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 SLC2A9Q9NRM0 540 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 SDHAF3Q9NRP4 125 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 FGF21Q9NSA1 209 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 POMT1Q9Y6A1 747 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 DIDO1Q9BTC0 2240 aaKnown RBP8.83□□□□□ -1
PTPRA-203ENST00000356147 A0A1B0GV90 55 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 CYB5BO43169 146 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 TRGC2P03986 189 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 ATP6V0CP27449 155 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 S100A2P29034 98 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 SLC35G3Q8N808 338 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 CYB561D1Q8N8Q1 229 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 ZDHHC12Q96GR4 267 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 TP53RKQ96S44 253 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 PLEKHA2Q9HB19 425 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 PLEK2Q9NYT0 353 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 SLC7A11Q9UPY5 501 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 EML6Q6ZMW3 1958 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 NKX2-6A6NCS4 301 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 SERPINE3A8MV23 424 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 H3BP45 60 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 SSSCA1O60232 199 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 GPR137BO60478 399 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 OR2J2O76002 312 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 HEXBP07686 556 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 RND3P61587 244 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 EWSR1Q01844 656 aaKnown RBP eCLIP8.83□□□□□ -1
PTPRA-203ENST00000356147 RSU1Q15404 277 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 SLC25A47Q6Q0C1 308 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 SSC4DQ8WTU2 575 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 TMEM171Q8WVE6 324 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 MUCL1Q96DR8 90 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 MEGF10Q96KG7 1140 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 ZNF385AQ96PM9 386 aaKnown RBP8.83□□□□□ -1
PTPRA-203ENST00000356147 GINS3Q9BRX5 216 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 LMAN1LQ9HAT1 526 aa8.83□□□□□ -1
PTPRA-203ENST00000356147 ZNF724A8MTY0 619 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 C3orf80F5H4A9 247 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 ST8SIA3O43173 380 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 TIAF1O95411 115 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 DRD1P21728 446 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 RAB5CP51148 216 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 STARD6P59095 220 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 MRPS21P82921 87 aaKnown RBP8.82□□□□□ -1
PTPRA-203ENST00000356147 DEFA6Q01524 100 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 RHEBQ15382 184 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 RSPO1Q2MKA7 263 aaPredicted RBP8.82□□□□□ -1
PTPRA-203ENST00000356147 PLPPR5Q32ZL2 321 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 CXorf66Q5JRM2 361 aaPredicted RBP8.82□□□□□ -1
PTPRA-203ENST00000356147 CCDC54Q8NEL0 328 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 UCN2Q96RP3 112 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 PBDC1Q9BVG4 233 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 TGIF2Q9GZN2 237 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 NKX2-4Q9H2Z4 354 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 TUBA4BQ9H853 241 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 MOB1AQ9H8S9 216 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 MMP17Q9ULZ9 603 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms