RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 IGKV1D-8A0A087WSZ0 117 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 TMEM14DPA8MWL7 114 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 GEMIN2O14893 280 aaKnown RBP12.08□□□□□ -0.48
TRIM4-201ENST00000349062 S100A6P06703 90 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 RAB13P51153 203 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 DHODHQ02127 395 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 PDZK1IP1Q13113 114 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 OR5T2Q8NGG2 359 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 OR56B2PQ8NGI1 322 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 ZNF442Q9H7R0 627 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 SLC17A5Q9NRA2 495 aa12.08□□□□□ -0.48
TRIM4-201ENST00000349062 ZNF503-AS2A6NEH8 195 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 HPNP05981 417 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 AGTR1P30556 359 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 RAB1AP62820 205 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 AIMP2Q13155 320 aaKnown RBP12.07□□□□□ -0.48
TRIM4-201ENST00000349062 RAB35Q15286 201 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 TMEM200AQ86VY9 491 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 OR51F2Q8NH61 342 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 GPHA2Q96T91 129 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 PRRT1Q99946 306 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 TLNRD1Q9H1K6 362 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 MBD2Q9UBB5 411 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 OR6C65A6NJZ3 312 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 PRSS44E7EML9 344 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 SP1P08047 785 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 FTH1P19P0C7X4 201 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 CD46P15529 392 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 RPA2P15927 270 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 GPM6AP51674 278 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 DEFB109BQ30KR1 87 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 PLEKHN1Q494U1 663 aaPredicted RBP12.07□□□□□ -0.48
TRIM4-201ENST00000349062 DCUN1D4Q92564 292 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 ZNF488Q96MN9 340 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 CDC6Q99741 560 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 SPTAN1Q13813 2472 aaKnown RBP12.07□□□□□ -0.48
TRIM4-201ENST00000349062 COL6A6A6NMZ7 2263 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 GTF3C1Q12789 2109 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 IGKV1-27A0A075B6S5 117 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 A0A0D9SG52 128 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 LOC390937A0A1W2PQ73 354 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 TMEM218A2RU14 115 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 ZNF735P0CB33 412 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 GSK3AP49840 483 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 LHX2P50458 406 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 GFRA1P56159 465 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 S100A10P60903 97 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 B2MP61769 119 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 SNRPEP62304 92 aaKnown RBP12.07□□□□□ -0.48
TRIM4-201ENST00000349062 QRFPP83859 136 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 SP6Q3SY56 376 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 PAN3Q58A45 887 aaKnown RBP12.07□□□□□ -0.48
TRIM4-201ENST00000349062 PLA2G2CQ5R387 149 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 MED9Q9NWA0 146 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 CRIM1Q9NZV1 1036 aa12.07□□□□□ -0.48
TRIM4-201ENST00000349062 INTS1Q8N201 2190 aaKnown RBP12.06□□□□□ -0.48
TRIM4-201ENST00000349062 SYNGR3O43761 229 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 SCGB1D2O95969 90 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 CRYBA1P05813 215 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 SELEP16581 610 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 NPBWR1P48145 328 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 NPBWR2P48146 333 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 SOX8P57073 446 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 SCAND1P57086 179 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 ZNF766Q5HY98 468 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 MRPL21Q7Z2W9 205 aaKnown RBP12.06□□□□□ -0.48
TRIM4-201ENST00000349062 FER1L6-AS2Q96M78 137 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 GPR87Q9BY21 358 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 CHST5Q9GZS9 411 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 BIN3Q9NQY0 253 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 MED12LQ86YW9 2145 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 MPTX1A8MV57 137 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 LYZL6O75951 148 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 S100A9P06702 114 aaKnown RBP12.06□□□□□ -0.48
TRIM4-201ENST00000349062 C1orf147Q96MC9 270 aaPredicted RBP12.06□□□□□ -0.48
TRIM4-201ENST00000349062 SLC7A11Q9UPY5 501 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 ATRXP46100 2492 aa12.06□□□□□ -0.48
TRIM4-201ENST00000349062 KLRC4-KLRK1H3BQV0 150 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 RAB6AP20340 208 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 RBP2P50120 134 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 CLDN18P56856 261 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 MEF2DQ14814 521 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 PHLDA2Q53GA4 152 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 LY6G6FQ5SQ64 297 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 C11orf87Q6NUJ2 197 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 DRAM2Q6UX65 266 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 DBX2Q6ZNG2 339 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 PRR18Q8N4B5 295 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 CPT1CQ8TCG5 803 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 SLC25A21Q9BQT8 299 aaPredicted RBP12.05□□□□□ -0.48
TRIM4-201ENST00000349062 SF3B5Q9BWJ5 86 aaKnown RBP12.05□□□□□ -0.48
TRIM4-201ENST00000349062 PECRQ9BY49 303 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 IL36RNQ9UBH0 155 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 ST3GAL6Q9Y274 331 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 TEX13DA0A0J9YY54 714 aaPredicted RBP12.05□□□□□ -0.48
TRIM4-201ENST00000349062 LOC102725191A0A1B0GVB3 256 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 CHRM2P08172 466 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 ZNF883P0CG24 379 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 HAAOP46952 286 aa12.05□□□□□ -0.48
TRIM4-201ENST00000349062 JMJD6Q6NYC1 403 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms