RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SERPINA3P01011 423 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 TK1P04183 234 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 ATF1P18846 271 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 AZGP1P25311 298 aaKnown RBP11.79□□□□□ -0.52
HMGN3-202ENST00000344726 IER3P46695 156 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 NPBWR2P48146 333 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 ERVFRD-1P60508 538 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 RPL31P62899 125 aaKnown RBP11.79□□□□□ -0.52
HMGN3-202ENST00000344726 COL10A1Q03692 680 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 SRSF4Q08170 494 aaKnown RBP11.79□□□□□ -0.52
HMGN3-202ENST00000344726 ZNF273Q14593 569 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 CNN3Q15417 329 aaKnown RBP11.79□□□□□ -0.52
HMGN3-202ENST00000344726 LRRC36Q1X8D7 754 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 PRR31Q5SQ13 230 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 TMEM200BQ69YZ2 307 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 LDLRAD3Q86YD5 345 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 TMEM86BQ8N661 226 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 DNAAF1Q8NEP3 725 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 OR4M1Q8NGD0 313 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 SSMEM1Q8WWF3 244 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 RDH12Q96NR8 316 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 HHLA2Q9UM44 414 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 RPL36Q9Y3U8 105 aaKnown RBP11.79□□□□□ -0.52
HMGN3-202ENST00000344726 POMT1Q9Y6A1 747 aa11.79□□□□□ -0.52
HMGN3-202ENST00000344726 K7N7A8 449 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 ZNF737O75373 536 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 ZFPL1O95159 310 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 LIMS3P0CW19 117 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 LIMS4P0CW20 117 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 CCL3L1P16619 93 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 ZNF20P17024 532 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 PEX2P28328 305 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 SAA4P35542 130 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 RBP2P50120 134 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 UBE2E1P51965 193 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 ATP1B3P54709 279 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 ZNF691Q5VV52 312 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 EGFL6Q8IUX8 553 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 MKXQ8IYA7 352 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 ZNF676Q8N7Q3 588 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 ZNF555Q8NEP9 628 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 OR13C3Q8NGS6 347 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 CNIH3Q8TBE1 160 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 C17orf50Q8WW18 174 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 RFT1Q96AA3 541 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 AJUBAQ96IF1 538 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 SPACA5Q96QH8 159 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 PDCD1LG2Q9BQ51 273 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 FGF20Q9NP95 211 aaPredicted RBP11.78□□□□□ -0.52
HMGN3-202ENST00000344726 INPP5EQ9NRR6 644 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 RBFOX1Q9NWB1 397 aaKnown RBP11.78□□□□□ -0.52
HMGN3-202ENST00000344726 ZNRD1Q9P1U0 126 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 MMP24Q9Y5R2 645 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 VWFP04275 2813 aa11.78□□□□□ -0.52
HMGN3-202ENST00000344726 IGKV1-12A0A0C4DH73 117 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 TMEM82A0PJX8 343 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 MEX3AA1L020 520 aaKnown RBP11.77□□□□□ -0.53
HMGN3-202ENST00000344726 ANKRD65E5RJM6 399 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 H0YAE9 185 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 IGKV1D-12P01611 117 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 CALCBP10092 127 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 BCL3P20749 454 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 EEF1B2P24534 225 aaKnown RBP11.77□□□□□ -0.53
HMGN3-202ENST00000344726 POU3F4P49335 361 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 GTF2A1P52655 376 aaPredicted RBP11.77□□□□□ -0.53
HMGN3-202ENST00000344726 RAG2P55895 527 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 MTCP1P56278 107 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 KRTAP10-3P60369 221 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 RCN1Q15293 331 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 TAF9Q16594 264 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 KLHL22Q53GT1 634 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 XAF1Q6GPH4 301 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 ASCC1Q8N9N2 400 aaKnown RBP11.77□□□□□ -0.53
HMGN3-202ENST00000344726 OR13C9Q8NGT0 318 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 TBC1D15Q8TC07 691 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 WFDC12Q8WWY7 111 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 EMG1Q92979 244 aaKnown RBP11.77□□□□□ -0.53
HMGN3-202ENST00000344726 MRPL48Q96GC5 212 aaKnown RBP11.77□□□□□ -0.53
HMGN3-202ENST00000344726 OPALINQ96PE5 141 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 JAM3Q9BX67 310 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 FAM234AQ9H0X4 552 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 WNK1Q9H4A3 2382 aa11.77□□□□□ -0.53
HMGN3-202ENST00000344726 TRBV2A0A0J9YWF9 115 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 MEIOCA2RUB1 952 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 POM121CA8CG34 1229 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 ANGPTL7O43827 346 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 GPR137BO60478 399 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 NDUFA7O95182 113 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 CHRM2P08172 466 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 FBP1P09467 338 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 PIPP12273 146 aaPredicted RBP11.76□□□□□ -0.53
HMGN3-202ENST00000344726 PRKACBP22694 351 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 DUSP1P28562 367 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 ETV1P50549 477 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 DLX6P56179 175 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 ADARB1P78563 741 aaKnown RBP11.76□□□□□ -0.53
HMGN3-202ENST00000344726 PDZK1IP1Q13113 114 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 BLMHQ13867 455 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 C17orf107Q6ZR85 190 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms