RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 KRTAP10-3P60369 221 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 ERVFRD-1P60508 538 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 ZNF85Q03923 595 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 IL24Q13007 206 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 TMED1Q13445 227 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 FBLN7Q53RD9 439 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 HCP5Q6MZN7 132 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 ZNF782Q6ZMW2 699 aaPredicted RBP10.11□□□□□ -0.79
SGCA-202ENST00000344627 SLC25A26Q70HW3 274 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 GDPD3Q7L5L3 318 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 EGFL6Q8IUX8 553 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 PRSS35Q8N3Z0 413 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 RNFT2Q96EX2 444 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 USE1Q9NZ43 259 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 OPN1MWP04001 364 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 OPN1MW2P0DN77 364 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 OPN1MW3P0DN78 364 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 ZNF20P17024 532 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 MPZP25189 248 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 POU3F4P49335 361 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 BMXP51813 675 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 SNU13P55769 128 aaKnown RBP10.1□□□□□ -0.79
SGCA-202ENST00000344627 EDDM3AQ14507 147 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 ZNF273Q14593 569 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 KPNB1Q14974 876 aaKnown RBP10.1□□□□□ -0.79
SGCA-202ENST00000344627 CNN3Q15417 329 aaKnown RBP10.1□□□□□ -0.79
SGCA-202ENST00000344627 LRRC75BQ2VPJ9 315 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 PLA1AQ53H76 456 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 TMEM244Q5VVB8 128 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 SLC35E4Q6ICL7 350 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 Q6ZSR3 168 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 CCDC54Q8NEL0 328 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 OR4C13Q8NGP0 309 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 OR2T6Q8NHC8 308 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 TRUB1Q8WWH5 349 aaKnown RBP10.1□□□□□ -0.79
SGCA-202ENST00000344627 EMG1Q92979 244 aaKnown RBP10.1□□□□□ -0.79
SGCA-202ENST00000344627 FGGYQ96C11 551 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 HES4Q9HCC6 221 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 MTCH1Q9NZJ7 389 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 KIAA2026Q5HYC2 2103 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 VWFP04275 2813 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 DSCAML1Q8TD84 2053 aa10.1□□□□□ -0.79
SGCA-202ENST00000344627 PRKDCP78527 4128 aaKnown RBP10.09□□□□□ -0.79
SGCA-202ENST00000344627 IGKV1-27A0A075B6S5 117 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 SNTNA6NMZ2 147 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 F8VVB4 439 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 F8VWA3 439 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 H3BUI4 141 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 J3QLW9 94 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 K7N7A8 449 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 EI24O14681 340 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 ARG1P05089 322 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 ALPLP05186 524 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 HTR1AP08908 422 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 CALCBP10092 127 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 ZNF19P17023 458 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 GABRR1P24046 479 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 KIR3DL2P43630 455 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 RBP2P50120 134 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 ATP1B3P54709 279 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 MTCP1P56278 107 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 ERVK11-1P61568 191 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 ACTC1P68032 377 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 ACTA1P68133 377 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 DYNC1I2Q13409 638 aaKnown RBP10.09□□□□□ -0.79
SGCA-202ENST00000344627 KPRPQ5T749 579 aaPredicted RBP10.09□□□□□ -0.79
SGCA-202ENST00000344627 ZFP1Q6P2D0 407 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 OR2G2Q8NGZ5 317 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 PP6455Q8WZ26 134 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 C10orf35Q96D05 121 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 NKX3-1Q99801 234 aaPredicted RBP10.09□□□□□ -0.79
SGCA-202ENST00000344627 NPFFR1Q9GZQ6 430 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 CHST5Q9GZS9 411 aa10.09□□□□□ -0.79
SGCA-202ENST00000344627 TET2Q6N021 2002 aaPredicted RBP10.08□□□□□ -0.8
SGCA-202ENST00000344627 XPNPEP2O43895 674 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 HAND1O96004 215 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 ZNF728P0DKX0 622 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 PRKACAP17612 351 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 ATF1P18846 271 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 BCL3P20749 454 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 PRKACBP22694 351 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 DUSP1P28562 367 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 OR12D2P58182 307 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 EMX1Q04741 257 aaPredicted RBP10.08□□□□□ -0.8
SGCA-202ENST00000344627 FAM189A2Q15884 450 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 MEDAGQ5VYS4 303 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 KCTD20Q7Z5Y7 419 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 ENTHD1Q8IYW4 607 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 ACBD7Q8N6N7 88 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 ZNF676Q8N7Q3 588 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 OR13C3Q8NGS6 347 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 OR13D1Q8NGV5 346 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 FAM110DQ8TAY7 271 aaPredicted RBP10.08□□□□□ -0.8
SGCA-202ENST00000344627 CFHR4Q92496 578 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 RFT1Q96AA3 541 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 ADAT3Q96EY9 351 aaPredicted RBP10.08□□□□□ -0.8
SGCA-202ENST00000344627 MRPL48Q96GC5 212 aaKnown RBP10.08□□□□□ -0.8
SGCA-202ENST00000344627 HRASLS5Q96KN8 279 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 SNX22Q96L94 193 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 CHST6Q9GZX3 395 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms