RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 PLATP00750 562 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 LIPFP07098 398 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 PRTN3P24158 256 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 SOX2P48431 317 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 IL13RA1P78552 427 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 IKZF1Q13422 519 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 DOC2BQ14184 412 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 SMIM21Q3B7S5 101 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 SLC25A26Q70HW3 274 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 RNF144BQ7Z419 303 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 BCL6BQ8N143 479 aaPredicted RBP14.89□□□□□ -0.03
USF2-202ENST00000343550 BATF2Q8N1L9 274 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 ST8SIA4Q92187 359 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 MAB21L2Q9Y586 359 aa14.89□□□□□ -0.03
USF2-202ENST00000343550 MYL12BO14950 172 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 GPR37O15354 613 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 SIGLEC5O15389 551 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 ENSAO43768 121 aaKnown RBP14.88□□□□□ -0.03
USF2-202ENST00000343550 INMTO95050 263 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 OCM2P0CE71 109 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 OCMP0CE72 109 aaPredicted RBP14.88□□□□□ -0.03
USF2-202ENST00000343550 HKR1P10072 659 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 SELLP14151 372 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 PRDX2P32119 198 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 TAS2R43P59537 309 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 FOXL1Q12952 345 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 DGUOKQ16854 277 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 LRRC10Q5BKY1 277 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 ASPHD2Q6ICH7 369 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 ZNF529Q6P280 563 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 CRIP3Q6Q6R5 217 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 MKXQ8IYA7 352 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 CD177Q8N6Q3 437 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 SLAMF9Q96A28 289 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 SDSLQ96GA7 329 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 PGLYRP3Q96LB9 341 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 CEP19Q96LK0 163 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 CNBD2Q96M20 576 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 DUX5Q96PT3 197 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 SPACA5Q96QH8 159 aa14.88□□□□□ -0.03
USF2-202ENST00000343550 NKX6-3A6NJ46 265 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 SULT1B1O43704 296 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 PPIAL4GP0DN37 164 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 CRHBPP24387 322 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 RPS11P62280 158 aaKnown RBP eCLIP14.87□□□□□ -0.03
USF2-202ENST00000343550 PDZK1IP1Q13113 114 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 ZNRF1Q8ND25 227 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 TMEM106AQ96A25 262 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 RPUSD1Q9UJJ7 312 aaKnown RBP14.87□□□□□ -0.03
USF2-202ENST00000343550 DNAJC9-AS1A6NH13 148 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 CD2P06729 351 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 CELP19835 753 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 NPBWR2P48146 333 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 POU3F4P49335 361 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 ACSM1Q08AH1 577 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 BAMBIQ13145 260 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 IRF3Q14653 427 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 YIF1BQ5BJH7 314 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 PNLDC1Q8NA58 520 aaKnown RBP14.87□□□□□ -0.03
USF2-202ENST00000343550 LY6G5BQ8NDX9 201 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 OR13C5Q8NGS8 318 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 RFT1Q96AA3 541 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 C1orf147Q96MC9 270 aaPredicted RBP14.87□□□□□ -0.03
USF2-202ENST00000343550 ZNF48Q96MX3 618 aaPredicted RBP14.87□□□□□ -0.03
USF2-202ENST00000343550 ZNF747Q9BV97 191 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 MND1Q9BWT6 205 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 MS4A7Q9GZW8 240 aaPredicted RBP14.87□□□□□ -0.03
USF2-202ENST00000343550 ZMAT3Q9HA38 289 aaKnown RBP14.87□□□□□ -0.03
USF2-202ENST00000343550 NEK6Q9HC98 313 aa14.87□□□□□ -0.03
USF2-202ENST00000343550 SLC25A10Q9UBX3 287 aaPredicted RBP14.87□□□□□ -0.03
USF2-202ENST00000343550 TRBV5-5A0A0J9YX44 114 aa14.86□□□□□ -0.03
USF2-202ENST00000343550 PNMA8CA0A1B0GUJ8 204 aa14.86□□□□□ -0.03
USF2-202ENST00000343550 KNG1P01042 644 aa14.86□□□□□ -0.03
USF2-202ENST00000343550 CD1AP06126 327 aa14.86□□□□□ -0.03
USF2-202ENST00000343550 RAB3AP20336 220 aa14.86□□□□□ -0.03
USF2-202ENST00000343550 CEBPDP49716 269 aaPredicted RBP14.86□□□□□ -0.03
USF2-202ENST00000343550 CAV3P56539 151 aa14.86□□□□□ -0.03
USF2-202ENST00000343550 BDH1Q02338 343 aa14.86□□□□□ -0.03
USF2-202ENST00000343550 KISS1Q15726 138 aa14.86□□□□□ -0.03
USF2-202ENST00000343550 UPRTQ96BW1 309 aa14.86□□□□□ -0.03
USF2-202ENST00000343550 OR5M11Q96RB7 305 aa14.86□□□□□ -0.03
USF2-202ENST00000343550 ZNF184Q99676 751 aaPredicted RBP14.86□□□□□ -0.03
USF2-202ENST00000343550 CNTD2Q9H8S5 307 aa14.86□□□□□ -0.03
USF2-202ENST00000343550 LSM2Q9Y333 95 aaKnown RBP14.86□□□□□ -0.03
USF2-202ENST00000343550 IGKV1-12A0A0C4DH73 117 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 ZNF879B4DU55 563 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 CYB5AP00167 134 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 IGKV1D-12P01611 117 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 HCKP08631 526 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 FGF12P61328 243 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 SPHARQ15513 63 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 Q499Y3 187 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 RBM48Q5RL73 367 aaKnown RBP14.85□□□□□ -0.03
USF2-202ENST00000343550 Q8IYB0 196 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 ZNF561Q8N587 486 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 OR51A2Q8NGJ7 313 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 DMRTB1Q96MA1 342 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 DCTN5Q9BTE1 182 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 TAS2R4Q9NYW5 299 aa14.85□□□□□ -0.03
USF2-202ENST00000343550 OR14J1Q9UGF5 321 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms