RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 ABHD14AQ9BUJ0 271 aa8.44□□□□□ -1.06
HOXA1-201ENST00000343060 ANGPTL4Q9BY76 406 aa8.44□□□□□ -1.06
HOXA1-201ENST00000343060 IL23AQ9NPF7 189 aa8.44□□□□□ -1.06
HOXA1-201ENST00000343060 SERINC1Q9NRX5 453 aa8.44□□□□□ -1.06
HOXA1-201ENST00000343060 NECAP2Q9NVZ3 263 aa8.44□□□□□ -1.06
HOXA1-201ENST00000343060 HS3ST3A1Q9Y663 406 aa8.44□□□□□ -1.06
HOXA1-201ENST00000343060 MTCH2Q9Y6C9 303 aa8.44□□□□□ -1.06
HOXA1-201ENST00000343060 V9GYS6 101 aa8.44□□□□□ -1.06
HOXA1-201ENST00000343060 TRBV24-1A0A075B6N3 115 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 FAM230AA0A1W2PPH8 454 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 IGSF23A1L1A6 192 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 CDRT15L2A8MXV6 281 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 STMND1H3BQB6 276 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 PGA4P0DJD7 388 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 PGA3P0DJD8 388 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 HOXB2P14652 356 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 EFNA3P52797 238 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 SUMO3P55854 103 aaPredicted RBP8.43□□□□□ -1.06
HOXA1-201ENST00000343060 UCP3P55916 312 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 GRB2P62993 217 aaKnown RBP8.43□□□□□ -1.06
HOXA1-201ENST00000343060 GABREP78334 506 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 SP6Q3SY56 376 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 SLC25A47Q6Q0C1 308 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 C6orf201Q7Z4U5 140 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 SPRED2Q7Z698 418 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 OR2C3Q8N628 320 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 OR13H1Q8NG92 308 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 RAB24Q969Q5 203 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 MISP3Q96FF7 219 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 ABHD14BQ96IU4 210 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 FAM210BQ96KR6 192 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 LYZL4Q96KX0 146 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 NOL4LQ96MY1 436 aaPredicted RBP8.43□□□□□ -1.06
HOXA1-201ENST00000343060 HDHD3Q9BSH5 251 aaPredicted RBP8.43□□□□□ -1.06
HOXA1-201ENST00000343060 PRO1933Q9H354 126 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 CDH20Q9HBT6 801 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 PITPNC1Q9UKF7 332 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 URGCP-MRPS24S4R325 110 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 EXPH5Q8NEV8 1989 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 TRAV1-1A0A0B4J248 108 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 METTL12A8MUP2 240 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 A8MWP6 167 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 CDS2O95674 445 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 TMEM225BP0DP42 221 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 FOLR1P15328 257 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 FGF7P21781 194 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 CAPZBP47756 277 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 HLA-DRB3P79483 266 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 DPPA2Q7Z7J5 298 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 OR5D18Q8NGL1 313 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 PP6455Q8WZ26 134 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 HAS2Q92819 552 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 NDUFAF3Q9BU61 184 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 EMC6Q9BV81 110 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 CHRNA10Q9GZZ6 450 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 SLC2A9Q9NRM0 540 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 POLR1DQ9Y2S0 133 aa8.43□□□□□ -1.06
HOXA1-201ENST00000343060 CCDC187A0A096LP49 1063 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 LOC102723971A0A1B0GUV8 181 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 SMCO3A2RU48 225 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 E9PLN8 166 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 HBE1P02100 147 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 DBHP09172 617 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 CCL5P13501 91 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 PNRC1Q12796 327 aaPredicted RBP8.42□□□□□ -1.06
HOXA1-201ENST00000343060 FOXF1Q12946 379 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 GNMTQ14749 295 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 ABCA11PQ4W5N1 156 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 PDZD11Q5EBL8 140 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 OGFOD3Q6PK18 319 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 FAM57BQ71RH2 274 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 ZFP62Q8NB50 900 aaPredicted RBP8.42□□□□□ -1.06
HOXA1-201ENST00000343060 TMEM171Q8WVE6 324 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 RELTQ969Z4 430 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 DDIT4LQ96D03 193 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 GNPNAT1Q96EK6 184 aaPredicted RBP8.42□□□□□ -1.06
HOXA1-201ENST00000343060 LURAP1Q96LR2 239 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 ACTR3CQ9C0K3 210 aaPredicted RBP8.42□□□□□ -1.06
HOXA1-201ENST00000343060 RNF208Q9H0X6 261 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 DCAF16Q9NXF7 216 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 ATG2AQ2TAZ0 1938 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 A0A0U1RQV5 110 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 A0A1B0GU03 582 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 A0A1B0GWJ7 208 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 HSPA12AO43301 675 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 CYB5R3P00387 301 aaPredicted RBP8.42□□□□□ -1.06
HOXA1-201ENST00000343060 IGHG1P01857 330 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 HOXA6P31267 233 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 COA6Q5JTJ3 125 aaKnown RBP8.42□□□□□ -1.06
HOXA1-201ENST00000343060 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.42□□□□□ -1.06
HOXA1-201ENST00000343060 FAM90A2PQ658T7 463 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 ABLIM2Q6H8Q1 611 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 TMEM183AQ8IXX5 376 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 PLPP5Q8NEB5 264 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 OR1N1Q8NGS0 311 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 OR6X1Q8NH79 312 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 C10orf35Q96D05 121 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 TMEM68Q96MH6 324 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 CRISPLD2Q9H0B8 497 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 SMOC1Q9H4F8 434 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms