RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 CLINT1Q14677 625 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 RNASE10Q5GAN6 216 aaKnown RBP6.98□□□□□ -1.29
CFAP54-201ENST00000342887 NMSQ5H8A3 153 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 TMEM211Q6ICI0 200 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 OPN5Q6U736 354 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 TMEM59Q9BXS4 323 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 OR2H1Q9GZK4 316 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 WFDC1Q9HC57 220 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 ANXA10Q9UJ72 324 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 DKKL1Q9UK85 242 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 PRSS47A8MTI9 375 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 TXNL1O43396 289 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 IFNA4P05014 189 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 SERPINF1P36955 418 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 CYCSP99999 105 aaKnown RBP6.98□□□□□ -1.29
CFAP54-201ENST00000342887 MSMO1Q15800 293 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 LYSMD4Q5XG99 296 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 CPEB3Q8NE35 698 aaKnown RBP6.98□□□□□ -1.29
CFAP54-201ENST00000342887 OR13C9Q8NGT0 318 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 SGCZQ96LD1 299 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 TAAR9Q96RI9 348 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 TREM2Q9NZC2 230 aa6.98□□□□□ -1.29
CFAP54-201ENST00000342887 DUXBA0A1W2PPF3 345 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 DNASE1L1P49184 302 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 CAV2P51636 162 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 CLRN1P58418 232 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 PSG4Q00888 419 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 IGFL2Q6UWQ7 119 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 KCTD9Q7L273 389 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 LINC00596Q86U02 117 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 OR10AD1Q8NGE0 317 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 IL22RA2Q969J5 263 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 NARS2Q96I59 477 aaKnown RBP6.97□□□□□ -1.29
CFAP54-201ENST00000342887 PFDN5Q99471 154 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 ARL6Q9H0F7 186 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 PPP1R14DQ9NXH3 145 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 VDAC3Q9Y277 283 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 IGKV1-6A0A0C4DH72 117 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 PPIHO43447 177 aaKnown RBP6.97□□□□□ -1.29
CFAP54-201ENST00000342887 RFPL3SP0C7P2 107 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 STARP49675 285 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 PDLIM3Q53GG5 364 aaPredicted RBP6.97□□□□□ -1.29
CFAP54-201ENST00000342887 AKIRIN2Q53H80 203 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 ZNF766Q5HY98 468 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 IGF2-ASQ6U949 168 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 PRR18Q8N4B5 295 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 OR1S2Q8NGQ3 325 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 NECAB3Q96P71 396 aaPredicted RBP6.97□□□□□ -1.29
CFAP54-201ENST00000342887 SELENOIQ9C0D9 397 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 RIMS4Q9H426 269 aaPredicted RBP6.97□□□□□ -1.29
CFAP54-201ENST00000342887 NKIRAS2Q9NYR9 191 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 RCL1Q9Y2P8 373 aaKnown RBP6.97□□□□□ -1.29
CFAP54-201ENST00000342887 SESN1Q9Y6P5 492 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 BRWD1Q9NSI6 2320 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 J3QW42 95 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 SLC31A2O15432 143 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 NFYBP25208 207 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 SPCS3P61009 180 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 RPP30P78346 268 aaKnown RBP6.97□□□□□ -1.29
CFAP54-201ENST00000342887 OC90Q02509 493 aaPredicted RBP6.97□□□□□ -1.29
CFAP54-201ENST00000342887 LHFPL2Q6ZUX7 228 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 C10orf53Q8N6V4 93 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 ZNF248Q8NDW4 579 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 APOBEC3DQ96AK3 386 aaPredicted RBP6.97□□□□□ -1.29
CFAP54-201ENST00000342887 MISP3Q96FF7 219 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 ZNF845Q96IR2 970 aaPredicted RBP6.97□□□□□ -1.29
CFAP54-201ENST00000342887 SULT4A1Q9BR01 284 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 CHIAQ9BZP6 476 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 GPR35Q9HC97 309 aa6.97□□□□□ -1.29
CFAP54-201ENST00000342887 FAM212BQ9NTI7 297 aaPredicted RBP6.97□□□□□ -1.29
CFAP54-201ENST00000342887 CXorf65A6NEN9 183 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 COLCA2A8K830 154 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 PTBP3O95758 552 aaKnown RBP6.96□□□□□ -1.29
CFAP54-201ENST00000342887 PMP2P02689 132 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 DANCRP0C864 163 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 ZNF44P15621 663 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 CSNK1A1P48729 337 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 RBM11P57052 281 aaKnown RBP6.96□□□□□ -1.29
CFAP54-201ENST00000342887 GTF3C1Q12789 2109 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 ODF4Q2M2E3 257 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 EIF2S3LQ2VIR3 472 aaKnown RBP6.96□□□□□ -1.29
CFAP54-201ENST00000342887 PLXDC2Q6UX71 529 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 CENPVQ7Z7K6 275 aaPredicted RBP6.96□□□□□ -1.29
CFAP54-201ENST00000342887 STX12Q86Y82 276 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 OR1F12Q8NHA8 337 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 HLA-CQ95604 372 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 ZMAT3Q9HA38 289 aaKnown RBP6.96□□□□□ -1.29
CFAP54-201ENST00000342887 CHMP1AQ9HD42 196 aaPredicted RBP6.96□□□□□ -1.29
CFAP54-201ENST00000342887 CACFD1Q9UGQ2 172 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 AK3Q9UIJ7 227 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 CSAG2Q9Y5P2 127 aa6.96□□□□□ -1.29
CFAP54-201ENST00000342887 CCDC187A0A096LP49 1063 aa6.96□□□□□ -1.3
CFAP54-201ENST00000342887 K7N7A8 449 aa6.96□□□□□ -1.3
CFAP54-201ENST00000342887 UBE2CO00762 179 aa6.96□□□□□ -1.3
CFAP54-201ENST00000342887 MMP9P14780 707 aa6.96□□□□□ -1.3
CFAP54-201ENST00000342887 PGAM2P15259 253 aa6.96□□□□□ -1.3
CFAP54-201ENST00000342887 G0S2P27469 103 aa6.96□□□□□ -1.3
CFAP54-201ENST00000342887 CSNK2A1P68400 391 aaPredicted RBP6.96□□□□□ -1.3
CFAP54-201ENST00000342887 IL13RA1P78552 427 aa6.96□□□□□ -1.3
CFAP54-201ENST00000342887 BAP18Q8IXM2 172 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms