RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 GPM6AP51674 278 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 CCL7P80098 99 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 SRSF3P84103 164 aaKnown RBP10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 FIP1L1Q6UN15 594 aaKnown RBP10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 ANKRD37Q7Z713 158 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 CNEP1R1Q8N9A8 125 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF385AQ96PM9 386 aaKnown RBP10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 STRADBQ9C0K7 418 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 DUSP15Q9H1R2 295 aaPredicted RBP10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 CDH20Q9HBT6 801 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 GBF1Q92538 1859 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 NUDT19A8MXV4 375 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 OR13G1Q8NGZ3 307 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 PHF7Q9BWX1 381 aaPredicted RBP10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 C5orf66Q9H5L9 145 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 UBE2ZQ9H832 354 aaPredicted RBP10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 MCTS1Q9ULC4 181 aaKnown RBP10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 LIPGQ9Y5X9 500 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 NPTNQ9Y639 398 aa10.95□□□□□ -0.66
SNRNP48-201ENST00000342415 KIAA2026Q5HYC2 2103 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 MS4A18H0YCH9 400 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 SIRPB1O00241 398 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 ADAM20O43506 726 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 IFNA10P01566 189 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 IFNA4P05014 189 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 S100A8P05109 93 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 FGF8P55075 233 aaPredicted RBP10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 BAXQ07812 192 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 MS4A18Q3C1V0 323 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 OR2T2Q6IF00 324 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 OR10J5Q8NHC4 309 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 NMES1Q9C002 83 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 SHANK1Q9Y566 2161 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 A0A1W2PPV4 95 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 EPOPA6NHQ4 379 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 SLC25A4P12235 298 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 HNF1AP20823 631 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 ROM1Q03395 351 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 TMEM267Q0VDI3 215 aaPredicted RBP10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 LY6G6FQ5SQ64 297 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 EXTL1Q92935 676 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 NAT6Q93015 286 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 CABLES2Q9BTV7 478 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 DUSP23Q9BVJ7 150 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 SEC11CQ9BY50 192 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 UFSP2Q9NUQ7 469 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 WSB1Q9Y6I7 421 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 A6NCN8 305 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 RNF222A6NCQ9 220 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 NPIPB9F8W1W9 429 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 CELA2AP08217 269 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 GALNSP34059 522 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 UNC119Q13432 240 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF345Q14585 488 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 MALSU1Q96EH3 234 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 OPA3Q9H6K4 179 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 HDGFL3Q9Y3E1 203 aa10.94□□□□□ -0.66
SNRNP48-201ENST00000342415 TPPPO94811 219 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 NXPH2O95156 264 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 VAMP5O95183 116 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 SCGB1D1O95968 90 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 FABP4P15090 132 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 ARG2P78540 354 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 MRPL49Q13405 166 aaKnown RBP10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF429Q86V71 674 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 LHX4Q969G2 390 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 CCDC74BQ96LY2 380 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 RASL10BQ96S79 203 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 TOLLIPQ9H0E2 274 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 SLC35B3Q9H1N7 401 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 TRBV23-1A0A0A0MS06 115 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 RAMP1O60894 148 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 HBE1P02100 147 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 MT-ND4LP03901 98 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 ECI1P42126 302 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 P2RY4P51582 365 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 CLDN15P56746 228 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 SSX2Q16385 188 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF528Q3MIS6 628 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 SYT13Q7L8C5 426 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 C1QL2Q7Z5L3 287 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 RTN4RL2Q86UN3 420 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 OR2C3Q8N628 320 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 GPR132Q9UNW8 380 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 TIMM10BQ9Y5J6 103 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 A0A1W2PPQ1 181 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 FTCDNL1E5RQL4 147 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 YIF1AO95070 293 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 SRFP11831 508 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 THBS4P35443 961 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 EDDM3AQ14507 147 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 TDHQ8IZJ6 230 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 UBAC2Q8NBM4 344 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 APCDD1LQ8NCL9 501 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 ENY2Q9NPA8 101 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 G6PC2Q9NQR9 355 aa10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 GAR1Q9NY12 217 aaKnown RBP10.93□□□□□ -0.66
SNRNP48-201ENST00000342415 DNASE2O00115 360 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms