RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 FAM3AP98173 230 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 PJVKQ0ZLH3 352 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 OR8B8Q15620 311 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 TRIM61Q5EBN2 209 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 WIPI1Q5MNZ9 446 aaPredicted RBP12.62□□□□□ -0.39
TDP2-201ENST00000341060 RPL7L1Q6DKI1 246 aaKnown RBP12.62□□□□□ -0.39
TDP2-201ENST00000341060 SLC39A7Q92504 469 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 GALNT14Q96FL9 552 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 MRPS18CQ9Y3D5 142 aaKnown RBP12.62□□□□□ -0.39
TDP2-201ENST00000341060 FREM1Q5H8C1 2179 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 K7EPK0 472 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 RPL12P30050 165 aaKnown RBP12.62□□□□□ -0.39
TDP2-201ENST00000341060 CLDN15P56746 228 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 ZNF92Q03936 586 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 SMCO1Q147U7 214 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 GUCA2BQ16661 112 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 PIGYQ3MUY2 71 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 ACER2Q5QJU3 275 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 GGNBP1Q5YKI7 109 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 OR2A2Q6IF42 318 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 OSR2Q8N2R0 312 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 FAM71E2Q8N5Q1 922 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 CPNE4Q96A23 557 aaPredicted RBP12.62□□□□□ -0.39
TDP2-201ENST00000341060 MRPL24Q96A35 216 aaKnown RBP12.62□□□□□ -0.39
TDP2-201ENST00000341060 GPR35Q9HC97 309 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 DEPPQ9NTK1 212 aa12.62□□□□□ -0.39
TDP2-201ENST00000341060 F8W036 122 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 CYTIPO60759 359 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 CST4P01036 141 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 FUT6P51993 359 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 BLOC1S1P78537 153 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 PDZK1IP1Q13113 114 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 DCAF12Q5T6F0 453 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 TMEM268Q5VZI3 342 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 FGFBP3Q8TAT2 258 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 TOMM40LQ969M1 308 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 MARS2Q96GW9 593 aaKnown RBP12.61□□□□□ -0.39
TDP2-201ENST00000341060 TECTBQ96PL2 329 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 PRRX2Q99811 253 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 NAA60Q9H7X0 242 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 BCO1Q9HAY6 547 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 PCDHB16Q9NRJ7 776 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 ST3GAL6Q9Y274 331 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 TRAPPC6AO75865 159 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 GAPDHP04406 335 aaKnown RBP12.61□□□□□ -0.39
TDP2-201ENST00000341060 ZNF728P0DKX0 622 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 RCC1P18754 421 aaPredicted RBP12.61□□□□□ -0.39
TDP2-201ENST00000341060 SKA3Q8IX90 412 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 FBXL14Q8N1E6 418 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 ESX1Q8N693 406 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 DYRK2Q92630 601 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 SEC11CQ9BY50 192 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 UQCC1Q9NVA1 299 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 SLC7A11Q9UPY5 501 aa12.61□□□□□ -0.39
TDP2-201ENST00000341060 KMT2EQ8IZD2 1858 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 TNRC6AQ8NDV7 1962 aaKnown RBP12.6□□□□□ -0.39
TDP2-201ENST00000341060 ZNF816-ZNF321PA0A0X1KG74 233 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 XRCC2O43543 280 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 LRP3O75074 770 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 TSPAN9O75954 239 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 JTBO76095 146 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 MMP7P09237 267 aaPredicted RBP12.6□□□□□ -0.39
TDP2-201ENST00000341060 H2AFB1P0C5Y9 115 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 TCN2P20062 427 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 GDF1P27539 372 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 CYB561P49447 251 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 SULT1A2P50226 295 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 GFRA1P56159 465 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 TMEM187Q14656 261 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 ABCA11PQ4W5N1 156 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 LDLRAD3Q86YD5 345 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 LRTM2Q8N967 370 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 ABHD3Q8WU67 409 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 RTN4IP1Q8WWV3 396 aaPredicted RBP12.6□□□□□ -0.39
TDP2-201ENST00000341060 SPSB4Q96A44 273 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 TLNRD1Q9H1K6 362 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 HRH4Q9H3N8 390 aa12.6□□□□□ -0.39
TDP2-201ENST00000341060 PDCD6O75340 191 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 OR5AC1P0C628 307 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 EDN3P14138 238 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 LPAR6P43657 344 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 CAV2P51636 162 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 SSPNQ14714 243 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 NRN1LQ496H8 165 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 PLCXD3Q63HM9 321 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 SLC23A3Q6PIS1 610 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 SLC22A25Q6T423 547 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.59□□□□□ -0.39
TDP2-201ENST00000341060 NAXEQ8NCW5 288 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 SUCNR1Q9BXA5 334 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 PRDM14Q9GZV8 571 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 RHOFQ9HBH0 211 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 ZNF286AQ9HBT8 521 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 TREM1Q9NP99 234 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 SLC2A9Q9NRM0 540 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 FBXL17Q9UF56 701 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 AMDHD2Q9Y303 409 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 LSM5Q9Y4Y9 91 aaKnown RBP12.59□□□□□ -0.39
TDP2-201ENST00000341060 CACNA1HO95180 2353 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms