RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 AMELYQ99218 206 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 PUS1Q9Y606 427 aaKnown RBP eCLIP13.2□□□□□ -0.3
BRAT1-201ENST00000340611 FREM1Q5H8C1 2179 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 A0A087WZY1 265 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 EIF1AYO14602 144 aaKnown RBP13.2□□□□□ -0.3
BRAT1-201ENST00000340611 DOK2O60496 412 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 MT-ATP6P00846 226 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 NKX6-1P78426 367 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-201ENST00000340611 RASGEF1BQ0VAM2 473 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 H1FNTQ75WM6 255 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-201ENST00000340611 CD163Q86VB7 1156 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 HIST3H2BBQ8N257 126 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 OR4S1Q8NGB4 309 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 MFSD8Q8NHS3 518 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 GPX7Q96SL4 187 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-201ENST00000340611 EIF5A2Q9GZV4 153 aaKnown RBP13.2□□□□□ -0.3
BRAT1-201ENST00000340611 COMMD4Q9H0A8 199 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 C1orf198Q9H425 327 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 ABI3Q9P2A4 366 aa13.2□□□□□ -0.3
BRAT1-201ENST00000340611 IGKV1D-43A0A0B4J1Z2 117 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 ARPC3O15145 178 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 RRP8O43159 456 aaKnown RBP13.19□□□□□ -0.3
BRAT1-201ENST00000340611 OR13C7P0DN81 318 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 SLC2A1P11166 492 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 PMELP40967 661 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 CEBPGP53567 150 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 RAP1AP62834 184 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 RAB11BQ15907 218 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 RNASE10Q5GAN6 216 aaKnown RBP13.19□□□□□ -0.3
BRAT1-201ENST00000340611 RNFT1Q5M7Z0 435 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 ZNF610Q8N9Z0 462 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 GPX8Q8TED1 209 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 KCNE4Q8WWG9 221 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 ZBTB8AQ96BR9 441 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 SEH1LQ96EE3 360 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 RRNAD1Q96FB5 475 aaKnown RBP13.19□□□□□ -0.3
BRAT1-201ENST00000340611 SRXN1Q9BYN0 137 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 POTEKPQ9BYX7 375 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 TTTY12Q9BZ98 90 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 CHST11Q9NPF2 352 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 B3GAT1Q9P2W7 334 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 KPTNQ9Y664 436 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 TRBV5-7A0A0A0MS05 114 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 MED19A0JLT2 244 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-201ENST00000340611 SMCO3A2RU48 225 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 HIST1H2BKO60814 126 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 MPZL1O95297 269 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 CD5P06127 495 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 HIST1H2BJP06899 126 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 SP1P08047 785 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 MMP7P09237 267 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-201ENST00000340611 SLC25A4P12235 298 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 HIST1H2BOP23527 126 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 S100A7P31151 101 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 HIST1H2BBP33778 126 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 MEOX1P50221 254 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 HIST1H2BDP58876 126 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 HIST1H2BCP62807 126 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 PLGLB1Q02325 96 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 HIST2H2BEQ16778 126 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 MEP1BQ16820 701 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-201ENST00000340611 OR2T2Q6IF00 324 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 IGF2-ASQ6U949 168 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 HIST1H2BHQ93079 126 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 S100A13Q99584 98 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 HIST1H2BNQ99877 126 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 HIST1H2BMQ99879 126 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 DEFB127Q9H1M4 99 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 LUZP4Q9P127 313 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 UPB1Q9UBR1 384 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 SLC22A13Q9Y226 551 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 TPRP12270 2363 aaKnown RBP13.19□□□□□ -0.3
BRAT1-201ENST00000340611 KIAA1549Q9HCM3 1950 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 NUDT19A8MXV4 375 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 K7EM74 188 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 KIR3DL2P43630 455 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 CLDN15P56746 228 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 TAS2R19P59542 299 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 TMEM225Q6GV28 225 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 SLC35D2Q76EJ3 337 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 PAQR4Q8N4S7 273 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-201ENST00000340611 SLC30A7Q8NEW0 376 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 FOXRED1Q96CU9 486 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-201ENST00000340611 ZNF845Q96IR2 970 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-201ENST00000340611 OR51B6Q9H340 312 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 C19orf12Q9NSK7 152 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 CGGBP1Q9UFW8 167 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-201ENST00000340611 LIPGQ9Y5X9 500 aa13.19□□□□□ -0.3
BRAT1-201ENST00000340611 A0A1B0GTI1 187 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 MSGN1A6NI15 193 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 UMAD1C9J7I0 102 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 TCF21O43680 179 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 BIDP55957 195 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 RPL27P61353 136 aaKnown RBP13.18□□□□□ -0.3
BRAT1-201ENST00000340611 GLO1Q04760 184 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 WDR38Q5JTN6 314 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 GGNBP1Q5YKI7 109 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 CLEC2AQ6UVW9 174 aa13.18□□□□□ -0.3
BRAT1-201ENST00000340611 MDS2Q8NDY4 140 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms