RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 C3orf80F5H4A9 247 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 TP53I11O14683 189 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 ATXN7O15265 892 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-201ENST00000340437 MSX1P28360 303 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 DUSP1P28562 367 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 FABP9Q0Z7S8 132 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 ZFP62Q8NB50 900 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-201ENST00000340437 HAS2Q92819 552 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 SPTSSAQ969W0 71 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 IFT22Q9H7X7 185 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 WFDC1Q9HC57 220 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 COA4Q9NYJ1 87 aa12.56□□□□□ -0.4
CPSF7-201ENST00000340437 PRSS44E7EML9 344 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 DEDDO75618 318 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 HTR5AP47898 357 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 SRYQ05066 204 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 ENDOGQ14249 297 aaKnown RBP12.55□□□□□ -0.4
CPSF7-201ENST00000340437 HABP2Q14520 560 aaPredicted RBP12.55□□□□□ -0.4
CPSF7-201ENST00000340437 PPA1Q15181 289 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 OR51B6Q9H340 312 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 CRLF2Q9HC73 371 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 FAM24AA6NFZ4 105 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 APOC1P02654 83 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 FCGR3AP08637 254 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 ZNF84P51523 738 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 HERV-K104P61576 105 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 BTNL8Q6UX41 500 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 KCNJ16Q9NPI9 418 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 ST3GAL6Q9Y274 331 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 ACACAQ13085 2346 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 IGHV3-64DA0A0J9YX35 117 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 TAAR5O14804 337 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 ACAA1P09110 424 aaPredicted RBP12.55□□□□□ -0.4
CPSF7-201ENST00000340437 PTAFRP25105 342 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 PPP1CCP36873 323 aaKnown RBP12.55□□□□□ -0.4
CPSF7-201ENST00000340437 RARRES2Q99969 163 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 ABHD14AQ9BUJ0 271 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 PRDM6Q9NQX0 595 aa12.55□□□□□ -0.4
CPSF7-201ENST00000340437 MRPS17Q9Y2R5 130 aaKnown RBP12.55□□□□□ -0.4
CPSF7-201ENST00000340437 CPAMD8Q8IZJ3 1885 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 A0A1W2PQM1 296 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 OTX2P32243 289 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 THBS4P35443 961 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 SHBQ15464 509 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 HAGHQ16775 308 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 ZNF565Q8N9K5 539 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 HIST1H2BAQ96A08 127 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 CCDC74BQ96LY2 380 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 CHST5Q9GZS9 411 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 NECAP2Q9NVZ3 263 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 MTCH2Q9Y6C9 303 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 CST7O76096 145 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 CCL2P13500 99 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 PRF1P14222 555 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 RSPO1Q2MKA7 263 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-201ENST00000340437 NCMAPQ5T1S8 102 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 TMEM268Q5VZI3 342 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 PLCXD3Q63HM9 321 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 RABEPKQ7Z6M1 372 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 OR6S1Q8NH40 331 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 SPSB2Q99619 263 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 BCL2L14Q9BZR8 327 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 FBLN5Q9UBX5 448 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 UBE2J1Q9Y385 318 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-201ENST00000340437 MMP24Q9Y5R2 645 aa12.54□□□□□ -0.4
CPSF7-201ENST00000340437 PATE3B3GLJ2 98 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 OPN5Q6U736 354 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 FAM89BQ8N5H3 189 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 LUZP4Q9P127 313 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 CACFD1Q9UGQ2 172 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 TRAV20A0A0B4J274 112 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 SRFP11831 508 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 EPHA1P21709 976 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 C19orf12Q9NSK7 152 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 IGKV1-27A0A075B6S5 117 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 CCDC187A0A096LP49 1063 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 NUDT19A8MXV4 375 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 CTSDP07339 412 aaPredicted RBP12.53□□□□□ -0.4
CPSF7-201ENST00000340437 FBP1P09467 338 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 RGS19P49795 217 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 POLR2GP62487 172 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPSF7-201ENST00000340437 GNMTQ14749 295 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 IGSF11Q5DX21 431 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 OR14L1PQ8NHC6 308 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 PAPOLGQ9BWT3 736 aaKnown RBP12.53□□□□□ -0.4
CPSF7-201ENST00000340437 SLC2A9Q9NRM0 540 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 C19orf25Q9UFG5 118 aaPredicted RBP12.53□□□□□ -0.4
CPSF7-201ENST00000340437 HDGFL3Q9Y3E1 203 aa12.53□□□□□ -0.4
CPSF7-201ENST00000340437 A0A0J9YW62 118 aa12.52□□□□□ -0.4
CPSF7-201ENST00000340437 CRYM-AS1A6NIL9 109 aa12.52□□□□□ -0.4
CPSF7-201ENST00000340437 ZNF727A8MUV8 499 aa12.52□□□□□ -0.4
CPSF7-201ENST00000340437 RPS10P46783 165 aaKnown RBP12.52□□□□□ -0.4
CPSF7-201ENST00000340437 CXCL12P48061 93 aa12.52□□□□□ -0.4
CPSF7-201ENST00000340437 CRIP3Q6Q6R5 217 aa12.52□□□□□ -0.4
CPSF7-201ENST00000340437 TDHQ8IZJ6 230 aa12.52□□□□□ -0.4
CPSF7-201ENST00000340437 PP6455Q8WZ26 134 aa12.52□□□□□ -0.4
CPSF7-201ENST00000340437 CHRNA10Q9GZZ6 450 aa12.52□□□□□ -0.4
CPSF7-201ENST00000340437 NAA60Q9H7X0 242 aa12.52□□□□□ -0.4
CPSF7-201ENST00000340437 R4GN57 208 aa12.52□□□□□ -0.4
CPSF7-201ENST00000340437 PIEZO2Q9H5I5 2752 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms