RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 FAM90A12PA8MX19 464 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM90A5PA8MXJ8 464 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM90A23PA8MXZ1 464 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 CLDN25C9JDP6 229 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 XRCC3O43542 346 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 NXPH2O95156 264 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM90A15PP0C7V4 464 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM90A13PP0C7W8 464 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM90A14PP0C7W9 464 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM90A24PP0C7X0 464 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 NPBWR2P48146 333 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 RBM11P57052 281 aaKnown RBP12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 SMIM21Q3B7S5 101 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 TMEM69Q5SWH9 247 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 MOGAT3Q86VF5 341 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM90A1Q86YD7 464 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM58AQ8N1B3 248 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM89BQ8N5H3 189 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 VRK1Q99986 396 aaPredicted RBP12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 LPAR5Q9H1C0 372 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 BANF2Q9H503 90 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 PLEKHF2Q9H8W4 249 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 LAMP3Q9UQV4 416 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 NPTNQ9Y639 398 aa12.28□□□□□ -0.44
NIPAL3-202ENST00000339255 LRBAP50851 2863 aa12.27□□□□□ -0.44
NIPAL3-202ENST00000339255 SPG11Q96JI7 2443 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 A0A1W2PP11 408 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 FABP12A6NFH5 140 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 SRRM5B3KS81 715 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 IRF2P14316 349 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 SPIN3Q5JUX0 258 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 C1orf87Q8N0U7 546 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 ZCCHC24Q8N2G6 241 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 MFSD4AQ8N468 514 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 LRRC29Q8WV35 223 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 NEU4Q8WWR8 484 aaPredicted RBP12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 EMG1Q92979 244 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 HES4Q9HCC6 221 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 RBFOX1Q9NWB1 397 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 RNF7Q9UBF6 113 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 ST3GAL6Q9Y274 331 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 CENPEQ02224 2701 aa12.27□□□□□ -0.45
NIPAL3-202ENST00000339255 INHBBP09529 407 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 CDK2P24941 298 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 SSTR2P30874 369 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 MNDAP41218 407 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 PITPNBP48739 271 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 MRPS11P82912 194 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 PLA2G7Q13093 441 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 ZNF846Q147U1 533 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 ARL6IP1Q15041 203 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 MPV17LQ2QL34 196 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 FAM131AQ6UXB0 335 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 ZNF826PQ6ZT77 177 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 OR4M1Q8NGD0 313 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 GAL3ST1Q99999 423 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 CACNG6Q9BXT2 260 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 V9GYH0 126 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 USF3Q68DE3 2245 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 RAB27BO00194 218 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 PRKACAP17612 351 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 GLRA1P23415 457 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 PITPNAQ00169 270 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 IL13RA2Q14627 380 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 OR10R2Q8NGX6 335 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 SOSTQ9BQB4 213 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 SPACA1Q9HBV2 294 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 PLEKHA6Q9Y2H5 1048 aa12.26□□□□□ -0.45
NIPAL3-202ENST00000339255 IGHV1-69-2A0A0G2JMI3 117 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 F8VVB4 439 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 F8VWA3 439 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 LHBP01229 141 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 CD40LGP29965 261 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 VEGFCP49767 419 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 IL18Q14116 193 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 PIGYQ3MUY2 71 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 SPRNQ5BIV9 151 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 PYHIN1Q6K0P9 492 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 RAB3CQ96E17 227 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 ZNF488Q96MN9 340 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 IFT22Q9H7X7 185 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 DLL4Q9NR61 685 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 GLS2Q9UI32 602 aa12.25□□□□□ -0.45
NIPAL3-202ENST00000339255 KNG1P01042 644 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 PMELP40967 661 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 MRPS10P82664 201 aaKnown RBP12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 ZNF146Q15072 292 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 TAF9Q16594 264 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 HFEQ30201 348 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 ACP7Q6ZNF0 438 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 BIVMQ86UB2 503 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 ZNF295-AS1Q8N0V1 137 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 GCSAMQ8N6F7 178 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 NICN1Q9BSH3 213 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 CXorf56Q9H5V9 222 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 HSF4Q9ULV5 492 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 CRYBG3Q68DQ2 2970 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 ARID1AO14497 2285 aa12.24□□□□□ -0.45
NIPAL3-202ENST00000339255 A0A0G2JMP0 313 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms