RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 MITFO75030 526 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-202ENST00000337571 INMTO95050 263 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 ZNF728P0DKX0 622 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 FCGR1AP12314 374 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 MPZP25189 248 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 PAX6P26367 422 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 BMXP51813 675 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 EFNB2P52799 333 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 OR12D2P58182 307 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 EFNB1P98172 346 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 BNIP1Q12981 228 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 DYNC1I2Q13409 638 aaKnown RBP8.65□□□□□ -1.02
CAPN3-202ENST00000337571 FAM189A2Q15884 450 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 ATP6AP1Q15904 470 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 PLA1AQ53H76 456 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 ARSJQ5FYB0 599 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-202ENST00000337571 C12orf73Q69YU5 71 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 ZNF782Q6ZMW2 699 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-202ENST00000337571 FAM220AQ7Z4H9 259 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 ENTHD1Q8IYW4 607 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 C11orf42Q8N5U0 333 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 KLHDC1Q8N7A1 406 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 C11orf44Q8N8P7 122 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 OR10H4Q8NGA5 316 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 RPS4Y2Q8TD47 263 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 RFKQ969G6 155 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 FOXRED1Q96CU9 486 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-202ENST00000337571 SLC7A6OSQ96CW6 309 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-202ENST00000337571 BORCS8Q96FH0 119 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 CEP19Q96LK0 163 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 CDCA4Q9BXL8 241 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 HES4Q9HCC6 221 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 TBL2Q9Y4P3 447 aaKnown RBP8.65□□□□□ -1.02
CAPN3-202ENST00000337571 AP4S1Q9Y587 144 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 A0A1W2PQL4 384 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-202ENST00000337571 hADV38S2A0JD32 116 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 H3BSH0 61 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 SULT1C4O75897 302 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 RBP4P02753 201 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 OCM2P0CE71 109 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 OCMP0CE72 109 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-202ENST00000337571 CCL1P22362 96 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 EPHA2P29317 976 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 HTR1FP30939 366 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 RAB13P51153 203 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 ATP1B3P54709 279 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 ERVK11-1P61568 191 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 EMX1Q04741 257 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-202ENST00000337571 MEF2CQ06413 473 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-202ENST00000337571 ZNF273Q14593 569 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 CNN3Q15417 329 aaKnown RBP8.64□□□□□ -1.03
CAPN3-202ENST00000337571 UBE2V2Q15819 145 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 SSX2Q16385 188 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 KDM4DQ6B0I6 523 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 Q6ZSR3 168 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 CATSPERDQ86XM0 798 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 Q8IYB0 196 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 AJUBAQ96IF1 538 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 SNX22Q96L94 193 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 ZNF714Q96N38 554 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 CADM1Q9BY67 442 aaKnown RBP8.64□□□□□ -1.03
CAPN3-202ENST00000337571 PRSS22Q9GZN4 317 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 FOXJ3Q9UPW0 622 aa8.64□□□□□ -1.03
CAPN3-202ENST00000337571 FAM90A8PA6NJQ4 464 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 VGLL3A8MV65 326 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 ATP5HO75947 161 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 OPN1MWP04001 364 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 UBCP0CG48 685 aaKnown RBP8.63□□□□□ -1.03
CAPN3-202ENST00000337571 OPN1MW2P0DN77 364 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 OPN1MW3P0DN78 364 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 IGHV1-8P0DP01 117 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 LORP23490 312 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-202ENST00000337571 GABRR1P24046 479 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 PEX2P28328 305 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 RBP2P50120 134 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 TMED1Q13445 227 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 EDDM3AQ14507 147 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 C1orf146Q5VVC0 180 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 CRIP3Q6Q6R5 217 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 ZBTB49Q6ZSB9 765 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 SLC25A26Q70HW3 274 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 LHFPL4Q7Z7J7 247 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 AMIGO2Q86SJ2 522 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 OR8H2Q8N162 312 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 ZNF676Q8N7Q3 588 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 OR11H6Q8NGC7 330 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 OR8J1Q8NGP2 316 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 PIFOQ8TCI5 191 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 PP6455Q8WZ26 134 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 EMG1Q92979 244 aaKnown RBP8.63□□□□□ -1.03
CAPN3-202ENST00000337571 SLAMF9Q96A28 289 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 C10orf35Q96D05 121 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 GABARAPL1Q9H0R8 117 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 RIBC2Q9H4K1 309 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 MTCH1Q9NZJ7 389 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 GNG8Q9UK08 70 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 TCF19Q9Y242 345 aa8.63□□□□□ -1.03
CAPN3-202ENST00000337571 MEX3AA1L020 520 aaKnown RBP8.62□□□□□ -1.03
CAPN3-202ENST00000337571 FUOMA2VDF0 154 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 F2RL2O00254 374 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms