RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MSGN1A6NI15 193 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 A6NNC1 897 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 CD8AP01732 235 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 ZNF121P58317 390 aaPredicted RBP14.28□□□□□ -0.12
NPHP3-201ENST00000337331 BAXQ07812 192 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 SHBQ15464 509 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 CBLN3Q6UW01 205 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 ZNF596Q8TC21 504 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 MRGPRX4Q96LA9 322 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 C4orf45Q96LM5 186 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 SOX7Q9BT81 388 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 PLK3Q9H4B4 646 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 POLR2AP24928 1970 aaKnown RBP14.28□□□□□ -0.12
NPHP3-201ENST00000337331 IGHV3-15A0A0B4J1V0 119 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 H0YL77 283 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 CT62P0C5K7 136 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 CD200P41217 278 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 KRTDAPP60985 99 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 PRICKLE4Q2TBC4 344 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 GPX8Q8TED1 209 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 WFIKKN1Q96NZ8 548 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 TBX15Q96SF7 602 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 NMES1Q9C002 83 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 SEBOXQ9HB31 216 aaPredicted RBP14.28□□□□□ -0.12
NPHP3-201ENST00000337331 DHHO43323 396 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 AADACP22760 399 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 CDKN2AP42771 156 aaKnown RBP14.28□□□□□ -0.12
NPHP3-201ENST00000337331 ARSJQ5FYB0 599 aaPredicted RBP14.28□□□□□ -0.12
NPHP3-201ENST00000337331 ADAMTS17Q8TE56 1095 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 PLEKHF2Q9H8W4 249 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 NRXN2Q9P2S2 1712 aa14.28□□□□□ -0.12
NPHP3-201ENST00000337331 WDR1O75083 606 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 TBX6O95947 436 aaPredicted RBP14.27□□□□□ -0.12
NPHP3-201ENST00000337331 TBPP20226 339 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 HNRNPA3P51991 378 aaKnown RBP14.27□□□□□ -0.12
NPHP3-201ENST00000337331 FMODQ06828 376 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 SP6Q3SY56 376 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 ABLIM2Q6H8Q1 611 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 MSL2Q9HCI7 577 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 HEYLQ9NQ87 328 aaPredicted RBP14.27□□□□□ -0.12
NPHP3-201ENST00000337331 SHISA8B8ZZ34 492 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 NPIPB8E9PQR5 432 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 TMEM127O75204 238 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 FAHP16930 419 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 DUSP1P28562 367 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 CDAP32320 146 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 HIST1H3AP68431 136 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 CLEC18BQ6UXF7 455 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 OR10A7Q8NGE5 316 aa14.27□□□□□ -0.12
NPHP3-201ENST00000337331 RYDENQ9NUL5 291 aaKnown RBP14.27□□□□□ -0.12
NPHP3-201ENST00000337331 TRIOBPQ9H2D6 2365 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 A0A1B0GWJ7 208 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 LILRA5A6NI73 299 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 NRASP01111 189 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 PGA3P0DJD8 388 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 SLC25A1P53007 311 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 NANOS3P60323 173 aaKnown RBP14.27□□□□□ -0.13
NPHP3-201ENST00000337331 EDDM3AQ14507 147 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 LY6G6FQ5SQ64 297 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 SAPCD1Q5SSQ6 148 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 OR5AS1Q8N127 324 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 TIMM10BQ9Y5J6 103 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 GSTP1P09211 210 aaKnown RBP14.27□□□□□ -0.13
NPHP3-201ENST00000337331 MMP9P14780 707 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 EDDM3BP56851 147 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 HERPUD1Q15011 391 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 OR13D1Q8NGV5 346 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 PLA2G2FQ9BZM2 168 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 ARV1Q9H2C2 271 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 FAM60AQ9NP50 221 aa14.27□□□□□ -0.13
NPHP3-201ENST00000337331 DEGS1O15121 323 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 SFT2D2O95562 160 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 PPP1CAP62136 330 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 SUMO1P63165 101 aaKnown RBP14.26□□□□□ -0.13
NPHP3-201ENST00000337331 PRSS53Q2L4Q9 553 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 COL5A1-AS1Q5SY13 56 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 TMEM268Q5VZI3 342 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 BRICD5Q6PL45 260 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.26□□□□□ -0.13
NPHP3-201ENST00000337331 OR10J5Q8NHC4 309 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 CACNA1EQ15878 2313 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 A0A096LPE4 126 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 A0A1W2PPZ6 126 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 SRFP11831 508 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 ZNF117Q03924 483 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 OR1N1Q8NGS0 311 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 RTN4IP1Q8WWV3 396 aaPredicted RBP14.26□□□□□ -0.13
NPHP3-201ENST00000337331 TP53RKQ96S44 253 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 ADAM19Q9H013 955 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 KLRC4-KLRK1H3BQV0 150 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 ANGPTL7O43827 346 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 ZNF92Q03936 586 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 CLN3Q13286 438 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 CDPF1Q6NVV7 123 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 SLC25A26Q70HW3 274 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 ZNF485Q8NCK3 441 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 MSI2Q96DH6 328 aaKnown RBP14.26□□□□□ -0.13
NPHP3-201ENST00000337331 MARS2Q96GW9 593 aaKnown RBP14.26□□□□□ -0.13
NPHP3-201ENST00000337331 FER1L6-AS2Q96M78 137 aa14.26□□□□□ -0.13
NPHP3-201ENST00000337331 DNAJC4Q9NNZ3 241 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms