RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ADAP1O75689 374 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 CD34P28906 385 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 RBP2P50120 134 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 IL13RA1P78552 427 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 FOXF2Q12947 444 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 ZNF585AQ6P3V2 769 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 MDP1Q86V88 176 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 OR5H2Q8NGV7 314 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 SSC4DQ8WTU2 575 aa10.87□□□□□ -0.67
LIMK1-201ENST00000336180 RAG2P55895 527 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 ALKBH6Q3KRA9 238 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 VWA1Q6PCB0 445 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 ALKAL2Q6UX46 152 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 MRPL21Q7Z2W9 205 aaKnown RBP10.86□□□□□ -0.67
LIMK1-201ENST00000336180 RPRMLQ8N4K4 120 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 NANPQ8TBE9 248 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 PP6455Q8WZ26 134 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 RDH8Q9NYR8 311 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 AK3Q9UIJ7 227 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 CBY1Q9Y3M2 126 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 INTS1Q8N201 2190 aaKnown RBP10.86□□□□□ -0.67
LIMK1-201ENST00000336180 EFSO43281 561 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 PPP3CBP16298 524 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 AGTR1P30556 359 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 MEOX2P50222 304 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 ZNF611Q8N823 705 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 OR13G1Q8NGZ3 307 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 OPN4Q9UHM6 478 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 ST3GAL6Q9Y274 331 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 GTF3C1Q12789 2109 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 L7N2F9 121 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 KLK10O43240 276 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 SNAPINO95295 136 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 TFF1P04155 84 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 LY6G6FQ5SQ64 297 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 HEXA-AS1Q9H8Q6 139 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 PCDHB16Q9NRJ7 776 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 PARPBPQ9NWS1 579 aa10.86□□□□□ -0.67
LIMK1-201ENST00000336180 C5orf51A6NDU8 294 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 SYNGR1O43759 233 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 CD74P04233 296 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 WNT5AP41221 380 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 PER3P56645 1201 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 PCBD1P61457 104 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 PRDX4Q13162 271 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 EXOSC2Q13868 293 aaKnown RBP10.85□□□□□ -0.67
LIMK1-201ENST00000336180 CXorf67Q86X51 503 aaPredicted RBP10.85□□□□□ -0.67
LIMK1-201ENST00000336180 MARS2Q96GW9 593 aaKnown RBP10.85□□□□□ -0.67
LIMK1-201ENST00000336180 ARL6Q9H0F7 186 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 METTL9Q9H1A3 318 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 PPA2Q9H2U2 334 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 DLL3Q9NYJ7 618 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 SH3BGRL2Q9UJC5 107 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 KIAA2026Q5HYC2 2103 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 ATRXP46100 2492 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 SULT1C2O00338 296 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 IL5P05113 134 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 BCL3P20749 454 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 CA6P23280 308 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 HOXA1P49639 335 aaPredicted RBP10.85□□□□□ -0.67
LIMK1-201ENST00000336180 TUSC1Q2TAM9 212 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 CHRFAM7AQ494W8 412 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 RIPPLY2Q5TAB7 128 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 TMEM178AQ8NBL3 297 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 LIME1Q9H400 295 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 GSN-AS1Q9NRJ2 163 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 ESPL1Q14674 2120 aa10.85□□□□□ -0.67
LIMK1-201ENST00000336180 IGKV3D-15A0A087WSY6 115 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 OR5H14A6NHG9 310 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 CHRM2P08172 466 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 ATP1B3P54709 279 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 OPCMLQ14982 345 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 SP6Q3SY56 376 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 TAAR6Q96RI8 345 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 A0A1B0GV90 55 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 ZNF732B4DXR9 585 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 M0R233 179 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 TMEM127O75204 238 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 SPDEFO95238 335 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 HOXB5P09067 269 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 HAGHLQ6PII5 290 aaPredicted RBP10.84□□□□□ -0.67
LIMK1-201ENST00000336180 OR10AD1Q8NGE0 317 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 NEK7Q8TDX7 302 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 MARVELD3Q96A59 401 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 PTX4Q96A99 478 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 ZNF442Q9H7R0 627 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 SLC7A11Q9UPY5 501 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 MRPS18CQ9Y3D5 142 aaKnown RBP10.84□□□□□ -0.67
LIMK1-201ENST00000336180 DBX1A6NMT0 343 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 CPT2P23786 658 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 PTGER4P35408 488 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 TEX261Q6UWH6 196 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 SEZ6L2Q6UXD5 910 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 OR2W3Q7Z3T1 314 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 BOLLQ8N9W6 283 aaKnown RBP10.84□□□□□ -0.67
LIMK1-201ENST00000336180 HPSE2Q8WWQ2 592 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 PRRT1Q99946 306 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 C5orf66Q9H5L9 145 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 COA4Q9NYJ1 87 aa10.84□□□□□ -0.67
LIMK1-201ENST00000336180 U3KQ87 197 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms