RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 HIST3H2BBQ8N257 126 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 TMEM156Q8N614 296 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 KDF1Q8NAX2 398 aaPredicted RBP12.15□□□□□ -0.46
SF1-202ENST00000334944 SLC5A7Q9GZV3 580 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 METTL8Q9H825 291 aaKnown RBP12.15□□□□□ -0.46
SF1-202ENST00000334944 A0A0G2JMM0 328 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 A0A1W2PPB8 328 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 A0A1W2PRS3 328 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 KIR3DP1A8MWS1 328 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 KLF7O75840 302 aaPredicted RBP12.15□□□□□ -0.46
SF1-202ENST00000334944 MPIG6BO95866 241 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 IL2RGP31785 369 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 ZNF93P35789 620 aaPredicted RBP12.15□□□□□ -0.46
SF1-202ENST00000334944 TNFRSF9Q07011 255 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 OR1J1Q8NGS3 322 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 Q8WTZ3 238 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 RARRES2Q99969 163 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 RHBDD3Q9Y3P4 386 aa12.15□□□□□ -0.46
SF1-202ENST00000334944 OR5H15A6NDH6 313 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 OR5H1A6NKK0 313 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 SEC14L6B5MCN3 397 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 ZNF587BE7ETH6 402 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 LDLRAD4O15165 306 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 CYB5BO43169 146 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 ZNHIT1O43257 154 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 DBHP09172 617 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 CX3CR1P49238 355 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 SCAND1P57086 179 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 C5orf24Q7Z6I8 188 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 THRSPQ92748 146 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 RBM24Q9BX46 236 aaKnown RBP12.14□□□□□ -0.47
SF1-202ENST00000334944 KCNJ16Q9NPI9 418 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 TP53TG5Q9Y2B4 290 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 A0A1W2PNV4 684 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 MEGF11A6BM72 1044 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 A6NNC1 897 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 PNLIPP16233 465 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 NKX6-1P78426 367 aaPredicted RBP12.14□□□□□ -0.47
SF1-202ENST00000334944 NAT6Q93015 286 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 GPER1Q99527 375 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 RFNGQ9Y644 331 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 IGHV1-45A0A0A0MS14 117 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 ZNF878C9JN71 531 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 TMEM127O75204 238 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 DKK1O94907 266 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 MSX1P28360 303 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 SULT1A2P50226 295 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 AKR1C8PQ5T2L2 129 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 GLIPR1L1Q6UWM5 242 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 PLXDC2Q6UX71 529 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 LYPD6Q86Y78 171 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 ZNF664Q8N3J9 261 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 PNLDC1Q8NA58 520 aaKnown RBP12.14□□□□□ -0.47
SF1-202ENST00000334944 OR5D14Q8NGL3 314 aa12.14□□□□□ -0.47
SF1-202ENST00000334944 PACRGQ96M98 296 aaPredicted RBP12.14□□□□□ -0.47
SF1-202ENST00000334944 DOCK7Q96N67 2140 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 TNFSF11O14788 317 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 SOCS1O15524 211 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 COX6A1P12074 109 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 ZNF17P17021 662 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 OTX2P32243 289 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 ERVFRD-1P60508 538 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 C1orf100Q5SVJ3 147 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 CDCP2Q5VXM1 449 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 YRDCQ86U90 279 aaKnown RBP12.13□□□□□ -0.47
SF1-202ENST00000334944 RNF138Q8WVD3 245 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 MALSU1Q96EH3 234 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 OXGR1Q96P68 337 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 BCO1Q9HAY6 547 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 B3GALT1Q9Y5Z6 326 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 TP53I11O14683 189 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 PRH1P02810 166 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 PATE4P0C8F1 98 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 RPP30P78346 268 aaKnown RBP12.13□□□□□ -0.47
SF1-202ENST00000334944 PNLIPRP3Q17RR3 467 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 DEGS2Q6QHC5 323 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 SLC22A24Q8N4F4 322 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 AGBL5Q8NDL9 886 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 FBXL17Q9UF56 701 aa12.13□□□□□ -0.47
SF1-202ENST00000334944 A0A087WZY1 265 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 DUS4LO95620 317 aaKnown RBP12.12□□□□□ -0.47
SF1-202ENST00000334944 IL2RAP01589 272 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 IFNA6P05013 189 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 MELTFP08582 738 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 NPSP0C0P6 89 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 SNCAP37840 140 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 ZNF260Q3ZCT1 412 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 SLC25A47Q6Q0C1 308 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 C17orf78Q8N4C9 275 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 DTD1Q8TEA8 209 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 SNX22Q96L94 193 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 PROK2Q9HC23 129 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 PNRC2Q9NPJ4 139 aaKnown RBP12.12□□□□□ -0.47
SF1-202ENST00000334944 SLC17A5Q9NRA2 495 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 IL17BQ9UHF5 180 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 A0A0A6YYD4 124 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 AQP7P3A6NL99 342 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 GEMIN2O14893 280 aaKnown RBP12.12□□□□□ -0.47
SF1-202ENST00000334944 HLA-GP17693 338 aa12.12□□□□□ -0.47
SF1-202ENST00000334944 CFPP27918 469 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms