RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CCDC54Q8NEL0 328 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 OR51D1Q8NGF3 324 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 PERPQ96FX8 193 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 WDFY2Q96P53 400 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 HIST1H2AAQ96QV6 131 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 GPER1Q99527 375 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 MICU1Q9BPX6 476 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 AIFM2Q9BRQ8 373 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 SLC7A11Q9UPY5 501 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 V9GY05 133 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 NOTCH2Q04721 2471 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 CCDC168Q8NDH2 2452 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 IGHV3OR15-7A0A075B7D8 119 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 BET1O15155 118 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 CEBPDP49716 269 aaPredicted RBP13.91□□□□□ -0.18
SHOX-201ENST00000334060 SCN1BQ07699 218 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 IKZF1Q13422 519 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 PAMR1Q6UXH9 720 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 PHYHIPQ92561 330 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 CCL17Q92583 94 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 SPSB1Q96BD6 273 aa13.91□□□□□ -0.18
SHOX-201ENST00000334060 A0A1B0GW55 424 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 hCG_1807616A0A1W2PRN6 198 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 IFITM5A6NNB3 132 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 VSTM5A8MXK1 200 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 ADH4P08319 380 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 DUX4L2P0CJ85 424 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 DUX4L3P0CJ86 424 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 DUX4L4P0CJ87 422 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 DUX4L5P0CJ88 424 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 DUX4L6P0CJ89 424 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 DUX4L7P0CJ90 424 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 DUSP1P28562 367 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 SSTR2P30874 369 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 CD80P33681 288 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 PDZK1IP1Q13113 114 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 ASAH1Q13510 395 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 IDNKQ5T6J7 187 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 DUX4L9Q6RFH8 374 aaPredicted RBP13.9□□□□□ -0.18
SHOX-201ENST00000334060 GLIPR1L1Q6UWM5 242 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 GCSAMQ8N6F7 178 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 ZNF525Q8N782 197 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 OR5T2Q8NGG2 359 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 SLC25A46Q96AG3 418 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 MS4A5Q9H3V2 200 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 BANF2Q9H503 90 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 DUX4Q9UBX2 424 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 IL19Q9UHD0 177 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 ZDHHC8Q9ULC8 765 aa13.9□□□□□ -0.18
SHOX-201ENST00000334060 MEIOCA2RUB1 952 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 PTBP3O95758 552 aaKnown RBP13.89□□□□□ -0.19
SHOX-201ENST00000334060 CD55P08174 381 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 TMEM225BP0DP42 221 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 CD37P11049 281 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 PTGFRP43088 359 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 UNC119Q13432 240 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 LHFPL2Q6ZUX7 228 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 CELF2-AS1Q8N7Q2 184 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 TLNRD1Q9H1K6 362 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 CYSLTR2Q9NS75 346 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 DECR2Q9NUI1 292 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 MRPS28Q9Y2Q9 187 aaKnown RBP13.89□□□□□ -0.19
SHOX-201ENST00000334060 LRP5LA4QPB2 252 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 OR5B21A6NL26 309 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 H7C417 338 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 NOS1APO75052 506 aaPredicted RBP13.89□□□□□ -0.19
SHOX-201ENST00000334060 GOSR1O95249 250 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 ATP1B3P54709 279 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 CARTPTQ16568 116 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 AWAT2Q6E213 333 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 C20orf204Q6ZNR8 217 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 OR51F2Q8NH61 342 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 LRRC29Q8WV35 223 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 LIN7BQ9HAP6 207 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 ING4Q9UNL4 249 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 PPP1R3CQ9UQK1 317 aa13.89□□□□□ -0.19
SHOX-201ENST00000334060 RP2O75695 350 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 ALDOBP05062 364 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 VSIG8P0DPA2 414 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 SERPINA2P20848 420 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 PIGYQ3MUY2 71 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 SLC22A6Q4U2R8 563 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 C1orf100Q5SVJ3 147 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 AVPI1Q5T686 147 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 FGFRL1Q8N441 504 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 LGALS14Q8TCE9 139 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 NICN1Q9BSH3 213 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 SLITRK2Q9H156 845 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 ELL3Q9HB65 397 aaPredicted RBP13.88□□□□□ -0.19
SHOX-201ENST00000334060 OR5V1Q9UGF6 321 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 TANC2Q9HCD6 1990 aa13.88□□□□□ -0.19
SHOX-201ENST00000334060 IGHV1-69-2A0A0G2JMI3 117 aa13.87□□□□□ -0.19
SHOX-201ENST00000334060 J3QT63 122 aa13.87□□□□□ -0.19
SHOX-201ENST00000334060 SLC17A2O00624 439 aa13.87□□□□□ -0.19
SHOX-201ENST00000334060 SSX4O60224 188 aa13.87□□□□□ -0.19
SHOX-201ENST00000334060 IL1AP01583 271 aa13.87□□□□□ -0.19
SHOX-201ENST00000334060 MPZP25189 248 aa13.87□□□□□ -0.19
SHOX-201ENST00000334060 HTR2CP28335 458 aa13.87□□□□□ -0.19
SHOX-201ENST00000334060 GLT8D1Q68CQ7 371 aa13.87□□□□□ -0.19
SHOX-201ENST00000334060 GDPD1Q8N9F7 314 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms