RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 PDCD6O75340 191 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 CALCRP30988 508 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 CLDN18P56856 261 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 RPL31P62899 125 aaKnown RBP12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 ZNF616Q08AN1 781 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 MUC20Q8N307 709 aaPredicted RBP12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 FADS6Q8N9I5 356 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 BARX1Q9HBU1 254 aaPredicted RBP12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 PSG11Q9UQ72 335 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 ERVH48-1M5A8F1 160 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 PLA2G5P39877 138 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 ZNF85Q03923 595 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 BSPH1Q075Z2 132 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 ARTNQ5T4W7 220 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 C6orf201Q7Z4U5 140 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 SPRR3Q9UBC9 169 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 ANKRD11Q6UB99 2663 aaPredicted RBP12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 PRAF2O60831 178 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 CD40P25942 277 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 SNRPNP63162 240 aaKnown RBP12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 LGI3Q8N145 548 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 CCL13Q99616 98 aa12.54□□□□□ -0.4
SYNGR1-203ENST00000328933 MED19A0JLT2 244 aaPredicted RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 LRRC3CA6NJW4 275 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 B9A039 149 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 FABP7O15540 132 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 PLPP2O43688 288 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 UPK1BO75841 260 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 JUNBP17275 347 aaPredicted RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 APOBEC3AP31941 199 aaPredicted RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 TGFBR1P36897 503 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 RFX2P48378 723 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 TLE4Q04727 773 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 PRR30Q53SZ7 412 aaPredicted RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 ZNF826PQ6ZT77 177 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 S100A7AQ86SG5 101 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 OR56B4Q8NH76 319 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 ARHGAP5-AS1Q96IT6 56 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 SEC22AQ96IW7 307 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 ZNF385CQ66K41 422 aaPredicted RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 NCCRP1Q6ZVX7 275 aaPredicted RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 OR8H3Q8N146 312 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 KLF14Q8TD94 323 aaPredicted RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 PINX1Q96BK5 328 aaKnown RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 SLC17A5Q9NRA2 495 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 EXOGQ9Y2C4 368 aaKnown RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 B8ZZF3 427 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 ZBTB25P24278 435 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 PDLIM4P50479 330 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 RBMXL3Q8N7X1 1067 aaKnown RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 FBXO7Q9Y3I1 522 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 DOCK10Q96BY6 2186 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 ZIC2O95409 532 aaPredicted RBP12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 HAND1O96004 215 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 CECR9P0C854 216 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 RAB11AP62491 216 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 ZNF554Q86TJ5 538 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 ZNF488Q96MN9 340 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 FRRS1LQ9P0K9 344 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 PTPRDP23468 1912 aa12.53□□□□□ -0.4
SYNGR1-203ENST00000328933 J3QKU1 62 aa12.52□□□□□ -0.4
SYNGR1-203ENST00000328933 CEACAM6P40199 344 aa12.52□□□□□ -0.4
SYNGR1-203ENST00000328933 PLA2G7Q13093 441 aa12.52□□□□□ -0.4
SYNGR1-203ENST00000328933 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.4
SYNGR1-203ENST00000328933 HPSE2Q8WWQ2 592 aa12.52□□□□□ -0.4
SYNGR1-203ENST00000328933 OR51J1Q9H342 316 aa12.52□□□□□ -0.4
SYNGR1-203ENST00000328933 GABARAPH6UMI1 98 aa12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 ARPC5O15511 151 aa12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 PRSS23O95084 383 aa12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 TDGF1P13385 188 aa12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 LIMS1P48059 325 aa12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 SUB1P53999 127 aaKnown RBP eCLIP12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 IAH1Q2TAA2 248 aaPredicted RBP12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 DTX1Q86Y01 620 aa12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 CNTD2Q9H8S5 307 aa12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 SLC25A10Q9UBX3 287 aaPredicted RBP12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 OR4C45A6NMZ5 311 aa12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 GLRXP35754 106 aa12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 CDKN1AP38936 164 aa12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 DOLPP1Q86YN1 238 aa12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 SLC25A21Q9BQT8 299 aaPredicted RBP12.52□□□□□ -0.41
SYNGR1-203ENST00000328933 NAV3Q8IVL0 2385 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 GYPAP02724 150 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 KITLGP21583 273 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 RPL19P84098 196 aaKnown RBP12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 BAMBIQ13145 260 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 XAF1Q6GPH4 301 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 NOXA1Q86UR1 476 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 SUCNR1Q9BXA5 334 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 RTN4RQ9BZR6 473 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 MBD2Q9UBB5 411 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 CYB5R1Q9UHQ9 305 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 TRAV1-2A0A0B4J238 106 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 TRAV39A0A0B4J263 110 aa12.51□□□□□ -0.41
SYNGR1-203ENST00000328933 PTTG1O95997 202 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms