RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 FN3KRPQ9HA64 309 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 NOTCH4Q99466 2003 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 LINC01387J3KSC0 135 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 ONECUT2O95948 504 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 MT-CO3P00414 261 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 RBMS3Q6XE24 437 aaKnown RBP12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 OR1J1Q8NGS3 322 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 GNPNAT1Q96EK6 184 aaPredicted RBP12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 HDHD3Q9BSH5 251 aaPredicted RBP12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 RIMS4Q9H426 269 aaPredicted RBP12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 FBXL17Q9UF56 701 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 AKAP6Q13023 2319 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 TRIM77I1YAP6 450 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 MT-CO2P00403 227 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 PTAFRP25105 342 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 SSX9Q7RTT3 188 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 CXorf67Q86X51 503 aaPredicted RBP12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 OR4A16Q8NH70 328 aa12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 ZNF107Q9UII5 783 aaPredicted RBP12.12□□□□□ -0.47
DNMT3B-202ENST00000328111 SNCAP37840 140 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 CASP6P55212 293 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 OR2B8PP59922 312 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 LINC00114Q6XXX2 140 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 PLPPR2Q96GM1 343 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 MS4A7Q9GZW8 240 aaPredicted RBP12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 RNASEK-C17orf49H0YIS7 233 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 B3GALNT1O75752 331 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 PJVKQ0ZLH3 352 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 C3AR1Q16581 482 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 H2BFWTQ7Z2G1 175 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 MALSU1Q96EH3 234 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 TECTBQ96PL2 329 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 SSX3Q99909 188 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 ATPIF1Q9UII2 106 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 PRELID3BQ9Y3B1 194 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 SHISA7A6NL88 538 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 LYPD3O95274 346 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 H2BFSP57053 126 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 TMEM255AQ5JRV8 349 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 DNASE2BQ8WZ79 361 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 PTX4Q96A99 478 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 PHYHIPLQ96FC7 376 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 SF3B5Q9BWJ5 86 aaKnown RBP12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 NAA60Q9H7X0 242 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 LHFPL6Q9Y693 200 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 R4GN57 208 aa12.11□□□□□ -0.47
DNMT3B-202ENST00000328111 ADAM10O14672 748 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 TMEM33P57088 247 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 HSD17B13Q7Z5P4 300 aaPredicted RBP12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 TUSC5Q8IXB3 177 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 SARAFQ96BY9 339 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 CHST5Q9GZS9 411 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 LPAR5Q9H1C0 372 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 ESRP2Q9H6T0 727 aaKnown RBP12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 WDR54Q9H977 334 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 MIDNQ504T8 468 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 FAM185AQ8N0U4 392 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 ZADH2Q8N4Q0 377 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 ZNF485Q8NCK3 441 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 APCDD1LQ8NCL9 501 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 BVESQ8NE79 360 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 RXFP4Q8TDU9 374 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 DYRK2Q92630 601 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 PIK3IP1Q96FE7 263 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 TRAF4Q9BUZ4 470 aaPredicted RBP12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 AKIRIN1Q9H9L7 192 aaPredicted RBP12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 DYNLRB1Q9NP97 96 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 TMEM100Q9NV29 134 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 LRP5LA4QPB2 252 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 TERTO14746 1132 aaKnown RBP12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 PGA4P0DJD7 388 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 PGA3P0DJD8 388 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 MEOX1P50221 254 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 DMWDQ09019 674 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 OR8B8Q15620 311 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 ADIRFQ15847 76 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 TUSC1Q2TAM9 212 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 PIGYQ3MUY2 71 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 ZNF260Q3ZCT1 412 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 C1orf100Q5SVJ3 147 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 PMS2CLQ68D20 193 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 CLRN3Q8NCR9 226 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 TMED3Q9Y3Q3 217 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 ARPC4-TTLL3A0A0A6YYG9 625 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 SPSB2Q99619 263 aa12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
DNMT3B-202ENST00000328111 ZNHIT1O43257 154 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 ZNF610Q8N9Z0 462 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 RTN4RQ9BZR6 473 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 IGKV3D-11A0A0A0MRZ8 115 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 NMBP08949 121 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 C19orf57Q0VDD7 668 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 PRAMEF5Q5TYX0 476 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 PRAMEF6Q5VXH4 476 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 FAM58AQ8N1B3 248 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 FAM24AA6NFZ4 105 aa12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 TRAF3IP2O43734 574 aaPredicted RBP12.09□□□□□ -0.47
DNMT3B-202ENST00000328111 KRASP01116 189 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms