RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 GAL3ST1Q99999 423 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 SAP30LQ9HAJ7 183 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 HES4Q9HCC6 221 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 GCM1Q9NP62 436 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 DECR2Q9NUI1 292 aa8.65□□□□□ -1.02
VIPAS39-201ENST00000327028 FOXI3A8MTJ6 420 aaPredicted RBP8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 RAB27BO00194 218 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 TPD52L2O43399 206 aaKnown RBP8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 CHRM2P08172 466 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 PRKACAP17612 351 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 PMELP40967 661 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 TAS2R20P59543 309 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 PIGYQ3MUY2 71 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 MOGAT2Q3SYC2 334 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 PYHIN1Q6K0P9 492 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 IZUMO1Q8IYV9 350 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM58AQ8N1B3 248 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 BATF2Q8N1L9 274 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 DTX3Q8N9I9 347 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 OR11L1Q8NGX0 322 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 LRRC29Q8WV35 223 aa8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 UTP20O75691 2785 aaKnown RBP8.65□□□□□ -1.03
VIPAS39-201ENST00000327028 A0A0G2JMP0 313 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 A0A0X1KG70 313 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A10PA6NDY2 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A18PA6NE21 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A16PA6NEW6 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A20PA6NIJ5 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A8PA6NJQ4 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A7PA6NKC0 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A22PA8MWA6 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A12PA8MX19 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A5PA8MXJ8 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A23PA8MXZ1 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A15PP0C7V4 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A13PP0C7W8 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A14PP0C7W9 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A24PP0C7X0 464 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 CD40LGP29965 261 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 PTH2RP49190 550 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 VEGFCP49767 419 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 MADCAM1Q13477 382 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 IL13RA2Q14627 380 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 C20orf204Q6ZNR8 217 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 LINC00596Q86U02 117 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 OR4M2Q8NGB6 313 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 OR10R2Q8NGX6 335 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 HPS1Q92902 700 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 SRRQ9GZT4 340 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 CLEC4MQ9H2X3 399 aaPredicted RBP8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 PPP1R3CQ9UQK1 317 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 ST3GAL6Q9Y274 331 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 SRRM5B3KS81 715 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 NXPH2O95156 264 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 GABRR1P24046 479 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 PPP5CP53041 499 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 PITPNAQ00169 270 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 FIP1L1Q6UN15 594 aaKnown RBP8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 C15orf40Q8WUR7 153 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 VRK1Q99986 396 aaPredicted RBP8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 PLEKHF2Q9H8W4 249 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 RASL12Q9NYN1 266 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 RNF7Q9UBF6 113 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 IL36RNQ9UBH0 155 aa8.64□□□□□ -1.03
VIPAS39-201ENST00000327028 TRAV18A0A075B6X5 111 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 H7C417 338 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 J3QRK9 145 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 IFNL4K9M1U5 179 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 GEMIN2O14893 280 aaKnown RBP8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 SOCS1O15524 211 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 EGR1P18146 543 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 TAF9Q16594 264 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 ZNF181Q2M3W8 571 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 MPV17LQ2QL34 196 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 SMIM21Q3B7S5 101 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 PYDC2Q56P42 97 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 ACP7Q6ZNF0 438 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 FAM90A1Q86YD7 464 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 GCSAMQ8N6F7 178 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 GDPD1Q8N9F7 314 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 CACNG6Q9BXT2 260 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 LAMP3Q9UQV4 416 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 NPTNQ9Y639 398 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 LRRC30A6NM36 301 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 WNT9BO14905 357 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 CTDSPLO15194 276 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 LHBP01229 141 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 HLA-DQB1P01920 261 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 IRF2P14316 349 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 HIST1H1DP16402 221 aaKnown RBP8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 GLRA1P23415 457 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 SPIN3Q5JUX0 258 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 BORCS5Q969J3 196 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 RAB3CQ96E17 227 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 ABHD1Q96SE0 405 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 CCDC32Q9BV29 185 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 RAB1BQ9H0U4 201 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 AUNIPQ9H7T9 357 aa8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 MRPS7Q9Y2R9 242 aaKnown RBP8.63□□□□□ -1.03
VIPAS39-201ENST00000327028 DYSFO75923 2080 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms