RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 VSIG10L2P0DP72 767 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 CALCBP10092 127 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 HTR1FP30939 366 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 ISL1P61371 349 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 BNIP1Q12981 228 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 C1orf146Q5VVC0 180 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 ZNF626Q68DY1 528 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 CCBE1Q6UXH8 406 aaPredicted RBP9.98□□□□□ -0.81
TPM3-204ENST00000323144 SLC25A26Q70HW3 274 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 ZDHHC13Q8IUH4 622 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 OR8H2Q8N162 312 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 OR2T6Q8NHC8 308 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 CFHR4Q92496 578 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 EMG1Q92979 244 aaKnown RBP9.98□□□□□ -0.81
TPM3-204ENST00000323144 ITFG2Q969R8 447 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 CHST6Q9GZX3 395 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 FAM234AQ9H0X4 552 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 HEXA-AS1Q9H8Q6 139 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 RBFOX1Q9NWB1 397 aaKnown RBP9.98□□□□□ -0.81
TPM3-204ENST00000323144 WARS2Q9UGM6 360 aaKnown RBP9.98□□□□□ -0.81
TPM3-204ENST00000323144 GNG8Q9UK08 70 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 TCF19Q9Y242 345 aa9.98□□□□□ -0.81
TPM3-204ENST00000323144 A0A1W2PPH5 198 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 METTL15A6NJ78 407 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 DYNC1I1O14576 645 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 IGHV1-8P0DP01 117 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 BCL3P20749 454 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 FASP25445 335 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 POU3F4P49335 361 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 RAB13P51153 203 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 FAM189A2Q15884 450 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 AANATQ16613 207 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 FBLN7Q53RD9 439 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 BAIAP2L2Q6UXY1 529 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 Q6ZTK2 550 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 RNF144BQ7Z419 303 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 RDH10Q8IZV5 341 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 OR10AC1Q8NH08 325 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 RFT1Q96AA3 541 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 EME1Q96AY2 570 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 FOXRED1Q96CU9 486 aaPredicted RBP9.97□□□□□ -0.81
TPM3-204ENST00000323144 ADAT3Q96EY9 351 aaPredicted RBP9.97□□□□□ -0.81
TPM3-204ENST00000323144 NPFFR1Q9GZQ6 430 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 SERTAD4Q9NUC0 356 aa9.97□□□□□ -0.81
TPM3-204ENST00000323144 H2AFY2Q9P0M6 372 aaPredicted RBP9.97□□□□□ -0.81
TPM3-204ENST00000323144 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.97□□□□□ -0.81
TPM3-204ENST00000323144 IGKV1-9A0A0C4DH69 117 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 A6NDX4 124 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 FAM90A8PA6NJQ4 464 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 PSPNO60542 156 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 GATBO75879 557 aaKnown RBP9.96□□□□□ -0.82
TPM3-204ENST00000323144 HAND1O96004 215 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 PRB2P02812 416 aaPredicted RBP9.96□□□□□ -0.82
TPM3-204ENST00000323144 UBCP0CG48 685 aaKnown RBP9.96□□□□□ -0.82
TPM3-204ENST00000323144 ZNF728P0DKX0 622 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 DUSP1P28562 367 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 KIR2DS4P43632 304 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 NPBWR2P48146 333 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 LGALS4P56470 323 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 ZNF91Q05481 1191 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 SSX2Q16385 188 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 BEAN1Q3B7T3 259 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 LIAT1Q6ZQX7 453 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 Q6ZS46 218 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 GDPD3Q7L5L3 318 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 FAM220AQ7Z4H9 259 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 OR52N4Q8NGI2 321 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 BORCS8Q96FH0 119 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 ZNF714Q96N38 554 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 RAB18Q9NP72 206 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 SLC7A11Q9UPY5 501 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 AP4S1Q9Y587 144 aa9.96□□□□□ -0.82
TPM3-204ENST00000323144 A0A0G2JK05 382 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 FAM172BPA6NC97 362 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 VGLL3A8MV65 326 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 ENTPD6O75354 484 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 FBXO24O75426 580 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 MMP23AO75900 390 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 RBP4P02753 201 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 OR2T7P0C7T2 308 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 CD28P10747 220 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 FCGR1AP12314 374 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 PRKACAP17612 351 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 GABRR1P24046 479 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 AZGP1P25311 298 aaKnown RBP9.95□□□□□ -0.82
TPM3-204ENST00000323144 OR3A1P47881 315 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 NANOS3P60323 173 aaKnown RBP9.95□□□□□ -0.82
TPM3-204ENST00000323144 ACTR3P61158 418 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 ACTA2P62736 377 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 ACTG2P63267 376 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 ACTC1P68032 377 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 ACTA1P68133 377 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 DYNC1I2Q13409 638 aaKnown RBP9.95□□□□□ -0.82
TPM3-204ENST00000323144 CNN3Q15417 329 aaKnown RBP9.95□□□□□ -0.82
TPM3-204ENST00000323144 GRK1Q15835 563 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 NSUN5P1Q3KNT7 163 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 SAMD5Q5TGI4 173 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 PRAMEF5Q5TYX0 476 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 OR4S1Q8NGB4 309 aa9.95□□□□□ -0.82
TPM3-204ENST00000323144 OR11H6Q8NGC7 330 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms