RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 TMEM251Q8N6I4 163 aa17.82■□□□□ 0.44
TTC39C-202ENST00000317571 RGCCQ9H4X1 137 aa17.82■□□□□ 0.44
TTC39C-202ENST00000317571 CALHM2Q9HA72 323 aa17.82■□□□□ 0.44
TTC39C-202ENST00000317571 TEX13DA0A0J9YY54 714 aaPredicted RBP17.81■□□□□ 0.44
TTC39C-202ENST00000317571 ATP6V1G2-DDX39BF2Z307 99 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 HOXB5P09067 269 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 ARHGDIBP52566 201 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 PPIAP62937 165 aaKnown RBP17.81■□□□□ 0.44
TTC39C-202ENST00000317571 SURF2Q15527 256 aaPredicted RBP17.81■□□□□ 0.44
TTC39C-202ENST00000317571 PLCXD3Q63HM9 321 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 DHRS13Q6UX07 377 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 BOLLQ8N9W6 283 aaKnown RBP17.81■□□□□ 0.44
TTC39C-202ENST00000317571 BPIFCQ8NFQ6 507 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 PIK3IP1Q96FE7 263 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 GPR87Q9BY21 358 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 PRRG4Q9BZD6 226 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 DECR2Q9NUI1 292 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 F8VVB4 439 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 F8VWA3 439 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 MT-CO3P00414 261 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 HLA-HP01893 362 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 RAB32Q13637 225 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 SNTB1Q13884 538 aaKnown RBP17.81■□□□□ 0.44
TTC39C-202ENST00000317571 RTL6Q6ICC9 239 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 PHYHIPLQ96FC7 376 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 CMSS1Q9BQ75 279 aaKnown RBP17.81■□□□□ 0.44
TTC39C-202ENST00000317571 ACKR4Q9NPB9 350 aa17.81■□□□□ 0.44
TTC39C-202ENST00000317571 C21orf140B9A014 251 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 TOR1AO14656 332 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 LYL1P12980 280 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 PDSS1Q5T2R2 415 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 OSR2Q8N2R0 312 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 LINC00470Q9BZP3 86 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 PRDM14Q9GZV8 571 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 ZC4H2Q9NQZ6 224 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 ZNF391Q9UJN7 358 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 ZNF816-ZNF321PA0A0X1KG74 233 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 FARS2O95363 451 aaKnown RBP17.8■□□□□ 0.44
TTC39C-202ENST00000317571 OR5H8P0DN80 308 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 NPBWR2P48146 333 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 FUT6P51993 359 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 PAN3Q58A45 887 aaKnown RBP17.8■□□□□ 0.44
TTC39C-202ENST00000317571 FAM122CQ6P4D5 195 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 LRRC46Q96FV0 321 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 FAM117AQ9C073 453 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 ST3GAL6Q9Y274 331 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 R4GN57 208 aa17.8■□□□□ 0.44
TTC39C-202ENST00000317571 ARID1AO14497 2285 aa17.79■□□□□ 0.44
TTC39C-202ENST00000317571 ZNF850A8MQ14 1090 aa17.79■□□□□ 0.44
TTC39C-202ENST00000317571 DNASE2O00115 360 aaPredicted RBP17.79■□□□□ 0.44
TTC39C-202ENST00000317571 CYCSP99999 105 aaKnown RBP17.79■□□□□ 0.44
TTC39C-202ENST00000317571 DEFA5Q01523 94 aa17.79■□□□□ 0.44
TTC39C-202ENST00000317571 PRSS54Q6PEW0 395 aa17.79■□□□□ 0.44
TTC39C-202ENST00000317571 METTL8Q9H825 291 aaKnown RBP17.79■□□□□ 0.44
TTC39C-202ENST00000317571 LINC01387J3KSC0 135 aa17.79■□□□□ 0.44
TTC39C-202ENST00000317571 XRCC2O43543 280 aa17.79■□□□□ 0.44
TTC39C-202ENST00000317571 RBM39Q14498 530 aaKnown RBP17.79■□□□□ 0.44
TTC39C-202ENST00000317571 NRN1LQ496H8 165 aa17.79■□□□□ 0.44
TTC39C-202ENST00000317571 C2orf50Q96LR7 162 aa17.79■□□□□ 0.44
TTC39C-202ENST00000317571 IL36GQ9NZH8 169 aa17.79■□□□□ 0.44
TTC39C-202ENST00000317571 C14orf166Q9Y224 244 aaKnown RBP17.79■□□□□ 0.44
TTC39C-202ENST00000317571 SHANK1Q9Y566 2161 aa17.79■□□□□ 0.44
TTC39C-202ENST00000317571 DOCK7Q96N67 2140 aa17.78■□□□□ 0.44
TTC39C-202ENST00000317571 CTSDP07339 412 aaPredicted RBP17.78■□□□□ 0.44
TTC39C-202ENST00000317571 CCNOP22674 350 aa17.78■□□□□ 0.44
TTC39C-202ENST00000317571 ATP1A1-AS1Q5TC04 95 aa17.78■□□□□ 0.44
TTC39C-202ENST00000317571 OR56B2PQ8NGI1 322 aa17.78■□□□□ 0.44
TTC39C-202ENST00000317571 CPNE2Q96FN4 548 aaPredicted RBP17.78■□□□□ 0.44
TTC39C-202ENST00000317571 HS3ST6Q96QI5 342 aa17.78■□□□□ 0.44
TTC39C-202ENST00000317571 B4GALT7Q9UBV7 327 aa17.78■□□□□ 0.44
TTC39C-202ENST00000317571 ZNF629Q9UEG4 869 aaPredicted RBP17.78■□□□□ 0.44
TTC39C-202ENST00000317571 LIPGQ9Y5X9 500 aa17.78■□□□□ 0.44
TTC39C-202ENST00000317571 DTYMKP23919 212 aa17.78■□□□□ 0.44
TTC39C-202ENST00000317571 ZNF611Q8N823 705 aa17.78■□□□□ 0.44
TTC39C-202ENST00000317571 STOML3Q8TAV4 291 aa17.78■□□□□ 0.44
TTC39C-202ENST00000317571 EDARQ9UNE0 448 aa17.78■□□□□ 0.44
TTC39C-202ENST00000317571 CRYM-AS1A6NIL9 109 aa17.77■□□□□ 0.44
TTC39C-202ENST00000317571 RPL36A-HNRNPH2H7BZ11 118 aa17.77■□□□□ 0.44
TTC39C-202ENST00000317571 IFNA2P01563 188 aa17.77■□□□□ 0.44
TTC39C-202ENST00000317571 TMEM164Q5U3C3 297 aa17.77■□□□□ 0.44
TTC39C-202ENST00000317571 TMEM200AQ86VY9 491 aa17.77■□□□□ 0.44
TTC39C-202ENST00000317571 OR1S2Q8NGQ3 325 aa17.77■□□□□ 0.44
TTC39C-202ENST00000317571 NARS2Q96I59 477 aaKnown RBP17.77■□□□□ 0.44
TTC39C-202ENST00000317571 BCO1Q9HAY6 547 aa17.77■□□□□ 0.44
TTC39C-202ENST00000317571 PCDHB10Q9UN67 800 aa17.77■□□□□ 0.44
TTC39C-202ENST00000317571 SLC7A11Q9UPY5 501 aa17.77■□□□□ 0.44
TTC39C-202ENST00000317571 FAM74A7A6NL05 159 aa17.77■□□□□ 0.43
TTC39C-202ENST00000317571 RBM11P57052 281 aaKnown RBP17.77■□□□□ 0.43
TTC39C-202ENST00000317571 SPEM2Q0P670 501 aa17.77■□□□□ 0.43
TTC39C-202ENST00000317571 FAM74A3Q4VXF1 159 aa17.77■□□□□ 0.43
TTC39C-202ENST00000317571 SLC25A26Q70HW3 274 aa17.77■□□□□ 0.43
TTC39C-202ENST00000317571 C5orf24Q7Z6I8 188 aa17.77■□□□□ 0.43
TTC39C-202ENST00000317571 HPSE2Q8WWQ2 592 aa17.77■□□□□ 0.43
TTC39C-202ENST00000317571 GSKIPQ9P0R6 139 aa17.77■□□□□ 0.43
TTC39C-202ENST00000317571 ARHGAP21Q5T5U3 1957 aa17.77■□□□□ 0.43
TTC39C-202ENST00000317571 HES3Q5TGS1 186 aa17.76■□□□□ 0.43
TTC39C-202ENST00000317571 SLC22A25Q6T423 547 aa17.76■□□□□ 0.43
TTC39C-202ENST00000317571 DHRS11Q6UWP2 260 aa17.76■□□□□ 0.43
TTC39C-202ENST00000317571 NUFIP2Q7Z417 695 aaKnown RBP17.76■□□□□ 0.43
TTC39C-202ENST00000317571 TOMM40LQ969M1 308 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms