RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 FAHP16930 419 aa6.67□□□□□ -1.34
CNOT4-201ENST00000315544 ZNF585BQ52M93 769 aa6.67□□□□□ -1.34
CNOT4-201ENST00000315544 ABHD12BQ7Z5M8 362 aaPredicted RBP6.67□□□□□ -1.34
CNOT4-201ENST00000315544 JAZF1Q86VZ6 243 aa6.67□□□□□ -1.34
CNOT4-201ENST00000315544 UCN2Q96RP3 112 aa6.67□□□□□ -1.34
CNOT4-201ENST00000315544 DIRC2Q96SL1 478 aa6.67□□□□□ -1.34
CNOT4-201ENST00000315544 MED11Q9P086 117 aa6.67□□□□□ -1.34
CNOT4-201ENST00000315544 METTL1Q9UBP6 276 aaKnown RBP6.67□□□□□ -1.34
CNOT4-201ENST00000315544 A0A087WWC5 75 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 A0A087WZY1 265 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 IGHV3-20A0A0C4DH32 117 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 TMEM269A0A1B0GVZ9 245 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 ZNF98A6NK75 572 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 EIF3GO75821 320 aaKnown RBP eCLIP6.66□□□□□ -1.34
CNOT4-201ENST00000315544 HLA-AP01891 365 aaKnown RBP6.66□□□□□ -1.34
CNOT4-201ENST00000315544 SEC11BP0C7V7 166 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 UCNP55089 124 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 TESK1Q15569 626 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 MRGPRG-AS1Q2M3A8 158 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 CCDC157Q569K6 752 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 FAM69BQ5VUD6 431 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 CDPF1Q6NVV7 123 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 Q6ZRM9 215 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 SPAG16Q8N0X2 631 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 SPACA9Q96E40 222 aaPredicted RBP6.66□□□□□ -1.34
CNOT4-201ENST00000315544 ABHD14BQ96IU4 210 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 C2orf50Q96LR7 162 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 GPR87Q9BY21 358 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 METTL8Q9H825 291 aaKnown RBP6.66□□□□□ -1.34
CNOT4-201ENST00000315544 DOCK7Q96N67 2140 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 DSCAMO60469 2012 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 CELSR2Q9HCU4 2923 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 HCRTR2O43614 444 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 RENP00797 406 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 FKBP2P26885 142 aaKnown RBP6.66□□□□□ -1.34
CNOT4-201ENST00000315544 AGTR1P30556 359 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 CLDN18P56856 261 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 ZNHIT3Q15649 155 aaPredicted RBP6.66□□□□□ -1.34
CNOT4-201ENST00000315544 DOK3Q7L591 496 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 CPEB2Q7Z5Q1 589 aaKnown RBP6.66□□□□□ -1.34
CNOT4-201ENST00000315544 PDZD9Q8IXQ8 264 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 METTL27Q8N6F8 245 aaPredicted RBP6.66□□□□□ -1.34
CNOT4-201ENST00000315544 SLC39A7Q92504 469 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 ATG5Q9H1Y0 275 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 GPR84Q9NQS5 396 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 AK3Q9UIJ7 227 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 LILRA1O75019 489 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 NEURL1O76050 574 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 CST4P01036 141 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 RFPL3SP0C7P2 107 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 SWI5Q1ZZU3 235 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 ACTBL2Q562R1 376 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 Q6ZR03 302 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 C1orf229Q6ZS94 237 aaPredicted RBP6.66□□□□□ -1.34
CNOT4-201ENST00000315544 PPP1R32Q7Z5V6 425 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 SPACA3Q8IXA5 215 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 FBXL14Q8N1E6 418 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 SPEF1Q9Y4P9 236 aa6.66□□□□□ -1.34
CNOT4-201ENST00000315544 IGKV1D-13A0A0B4J2D9 117 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 SCGNO76038 276 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 CGB3P0DN86 165 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 CGB7P0DN87 165 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 IGKV1-13P0DP09 117 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 CCL3P10147 92 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 RAB13P51153 203 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 BIDP55957 195 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 RPL7L1Q6DKI1 246 aaKnown RBP6.65□□□□□ -1.34
CNOT4-201ENST00000315544 SKA3Q8IX90 412 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 DEFB119Q8N690 84 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 OR9K2Q8NGE7 335 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 OR13C3Q8NGS6 347 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 TMEM170AQ8WVE7 144 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 PP6455Q8WZ26 134 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 COMMD4Q9H0A8 199 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 BCO1Q9HAY6 547 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 TMEM38BQ9NVV0 291 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 OCIAD1Q9NX40 245 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 UPB1Q9UBR1 384 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 ANXA10Q9UJ72 324 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 MMP24Q9Y5R2 645 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 PCNX2A6NKB5 2137 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 IGSF23A1L1A6 192 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 TEX46H3BTG2 121 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 CRYBA1P05813 215 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 ZNF93P35789 620 aaPredicted RBP6.65□□□□□ -1.34
CNOT4-201ENST00000315544 P2RY1P47900 373 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 DEFB133Q30KQ1 61 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 AWAT2Q6E213 333 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 KCTD18Q6PI47 426 aaPredicted RBP6.65□□□□□ -1.34
CNOT4-201ENST00000315544 SZRD1Q7Z422 152 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 MRPL24Q96A35 216 aaKnown RBP6.65□□□□□ -1.34
CNOT4-201ENST00000315544 SH3BGRL3Q9H299 93 aa6.65□□□□□ -1.34
CNOT4-201ENST00000315544 GPN1Q9HCN4 374 aaPredicted RBP6.65□□□□□ -1.34
CNOT4-201ENST00000315544 C2orf72A6NCS6 295 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 OR5H15A6NDH6 313 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 H0YL77 283 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 CLDN4O14493 209 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 OR10H2O60403 315 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 KHDRBS3O75525 346 aaKnown RBP6.65□□□□□ -1.35
CNOT4-201ENST00000315544 NUDT14O95848 222 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms