RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 PPA1Q15181 289 aa12.61□□□□□ -0.39
SCUBE2-201ENST00000309263 RHEBQ15382 184 aa12.61□□□□□ -0.39
SCUBE2-201ENST00000309263 USF2Q15853 346 aaPredicted RBP12.61□□□□□ -0.39
SCUBE2-201ENST00000309263 TMEM123Q8N131 208 aa12.61□□□□□ -0.39
SCUBE2-201ENST00000309263 SMRP1Q8NCR6 262 aa12.61□□□□□ -0.39
SCUBE2-201ENST00000309263 C1orf147Q96MC9 270 aaPredicted RBP12.61□□□□□ -0.39
SCUBE2-201ENST00000309263 RNF122Q9H9V4 155 aa12.61□□□□□ -0.39
SCUBE2-201ENST00000309263 GAR1Q9NY12 217 aaKnown RBP12.61□□□□□ -0.39
SCUBE2-201ENST00000309263 CXorf65A6NEN9 183 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 H3BP45 60 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 RPS23P62266 143 aaKnown RBP12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 UBE2V2Q15819 145 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 SLC22A25Q6T423 547 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 DOK3Q7L591 496 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 SLC38A9Q8NBW4 561 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 ZDHHC12Q96GR4 267 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 MEGF10Q96KG7 1140 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 FSCN3Q9NQT6 498 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 DOK5Q9P104 306 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 MMACHCQ9Y4U1 282 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 HS3ST3A1Q9Y663 406 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 PKDREJQ9NTG1 2253 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 ZNF814B7Z6K7 855 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 CSNK1EP49674 416 aaKnown RBP12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 RUNX1Q01196 453 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 CLEC12BQ2HXU8 276 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 PYY3Q5JQD4 70 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 CDX2Q99626 313 aaPredicted RBP12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 GPR61Q9BZJ8 451 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 AK3Q9UIJ7 227 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 NSG1A0A0A6YYJ2 146 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 TRBV11-1A0A0K0K1C0 115 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 ZNF724A8MTY0 619 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 ST8SIA3O43173 380 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 FABP4P15090 132 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 ZNF17P17021 662 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 NSUN5P2Q63ZY6 315 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 LURAP1LQ8IV03 231 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 ABCA1O95477 2261 aa12.6□□□□□ -0.39
SCUBE2-201ENST00000309263 SSSCA1O60232 199 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 DANCRP0C864 163 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 FOLR2P14207 255 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 TUBG1P23258 451 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 NKX6-1P78426 367 aaPredicted RBP12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 FAM3AP98173 230 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 THEM4Q5T1C6 240 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 C5orf24Q7Z6I8 188 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 LHFPL1Q86WI0 220 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 UBE2ZQ9H832 354 aaPredicted RBP12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 LIPT2A6NK58 231 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 IGHV2-70P01814 119 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 HEXBP07686 556 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 HERV-K104P61576 105 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 VAMP2P63027 116 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 LPAL2Q16609 132 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 SSX9Q7RTT3 188 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 DEFB123Q8N688 67 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 SHDQ96IW2 340 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 ZNF442Q9H7R0 627 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 PLEKHA2Q9HB19 425 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 STARD10Q9Y365 291 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 TGIF2-C20orf24A0A0A6YYL0 155 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 H3BQ15 152 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 PATE4P0C8F1 98 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 EPHA1P21709 976 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 UBAC2Q8NBM4 344 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 NEK7Q8TDX7 302 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 GNRHR2Q96P88 292 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 SUCNR1Q9BXA5 334 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 ANXA10Q9UJ72 324 aa12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 UBE2J1Q9Y385 318 aaPredicted RBP12.59□□□□□ -0.39
SCUBE2-201ENST00000309263 FAM157AC9JC47 383 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 KIAA0895LQ68EN5 471 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 NOXO1Q8NFA2 376 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 RAB39BQ96DA2 213 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 LIME1Q9H400 295 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 DMDP11532 3685 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 A0A1B0GV90 55 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 TRGC2P03986 189 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 APOBEC1P41238 236 aaKnown RBP12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 FAM189A2Q15884 450 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 SPNS3Q6ZMD2 512 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 OR10G3Q8NGC4 313 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 FGF21Q9NSA1 209 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 ZFP92A6NM28 416 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 MASP2O00187 686 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 PPP1R2P9O14990 202 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 EFNA2O43921 213 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 PRF1P14222 555 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 RNASE11Q8TAA1 199 aaKnown RBP12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 SLC2A9Q9NRM0 540 aa12.58□□□□□ -0.4
SCUBE2-201ENST00000309263 THADAQ6YHU6 1953 aa12.57□□□□□ -0.4
SCUBE2-201ENST00000309263 A0A1W2PQD3 144 aa12.57□□□□□ -0.4
SCUBE2-201ENST00000309263 SERPINE3A8MV23 424 aa12.57□□□□□ -0.4
SCUBE2-201ENST00000309263 OR7C1O76099 320 aaPredicted RBP12.57□□□□□ -0.4
SCUBE2-201ENST00000309263 GNRHRP30968 328 aa12.57□□□□□ -0.4
SCUBE2-201ENST00000309263 SMAD4Q13485 552 aaKnown RBP12.57□□□□□ -0.4
SCUBE2-201ENST00000309263 PIGYQ3MUY2 71 aa12.57□□□□□ -0.4
SCUBE2-201ENST00000309263 CYB561D1Q8N8Q1 229 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms