RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 OR14J1Q9UGF5 321 aa16.16■□□□□ 0.18
PDZRN3-202ENST00000308537 TMEM82A0PJX8 343 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 SNTNA6NMZ2 147 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 E9PI62 339 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 SLC1A7O00341 560 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 FBP1P09467 338 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 ATF1P18846 271 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 NPBWR2P48146 333 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 KRTAP10-3P60369 221 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 COL10A1Q03692 680 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 SRSF4Q08170 494 aaKnown RBP16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 ACSM1Q08AH1 577 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 NCR3LG1Q68D85 454 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 C17orf107Q6ZR85 190 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 LHFPL3Q86UP9 236 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 SYS1Q8N2H4 156 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 OR4M1Q8NGD0 313 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 WFDC12Q8WWY7 111 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 FGGYQ96C11 551 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 BORCS8Q96FH0 119 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 ADI1Q9BV57 179 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 ALG8Q9BVK2 526 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 SEBOXQ9HB31 216 aaPredicted RBP16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 ERVK13-1Q9NX77 482 aa16.15■□□□□ 0.18
PDZRN3-202ENST00000308537 IGKV1-12A0A0C4DH73 117 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 MEIOCA2RUB1 952 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 J3QLW9 94 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 IGKV1D-12P01611 117 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 HTR1AP08908 422 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 ZNF19P17023 458 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 AZGP1P25311 298 aaKnown RBP16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 CAPZA1P52907 286 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 ALKBH1Q13686 389 aaKnown RBP16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 CNN3Q15417 329 aaKnown RBP16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 KIAA2026Q5HYC2 2103 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 EGFL6Q8IUX8 553 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 OR52I1Q8NGK6 324 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 OR5D13Q8NGL4 314 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 ZNF696Q9H7X3 374 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 C8orf4Q9NR00 106 aa16.14■□□□□ 0.17
PDZRN3-202ENST00000308537 C17orf98A8MV24 154 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 MPZL2O60487 215 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 LIMS3P0CW19 117 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 LIMS4P0CW20 117 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 EEF1B2P24534 225 aaKnown RBP16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 RBP2P50120 134 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 ACTA2P62736 377 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 ACTG2P63267 376 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 RAB40BQ12829 278 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 SMN1Q16637 294 aaKnown RBP16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 ASPHD2Q6ICH7 369 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 BEND2Q8NDZ0 799 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 OR52N4Q8NGI2 321 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 OR4F5Q8NH21 305 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 LINC01006Q8NI28 216 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 RBFOX1Q9NWB1 397 aaKnown RBP16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 VPREB3Q9UKI3 123 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 HHLA2Q9UM44 414 aa16.13■□□□□ 0.17
PDZRN3-202ENST00000308537 TRBV2A0A0J9YWF9 115 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 A0A1B0GUS0 222 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 CLPSL1A2RUU4 121 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 H0YAE9 185 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 SPRY1O43609 319 aaPredicted RBP16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 INMTO95050 263 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 ZFPL1O95159 310 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 SERPINA3P01011 423 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 MT-ND2P03891 347 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 BCL3P20749 454 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 PAX6P26367 422 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 MIDNQ504T8 468 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 LDLRAD2Q5SZI1 272 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 Q6ZSV7 163 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 ZSCAN4Q8NAM6 433 aaPredicted RBP16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 RPS4Y2Q8TD47 263 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 RDH12Q96NR8 316 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 JAM3Q9BX67 310 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 DPAGT1Q9H3H5 408 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 SF3B6Q9Y3B4 125 aaKnown RBP16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 FAM96BQ9Y3D0 163 aa16.12■□□□□ 0.17
PDZRN3-202ENST00000308537 PSPNO60542 156 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 CHRM2P08172 466 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 PIPP12273 146 aaPredicted RBP16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 ATP1B3P54709 279 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 PROK1P58294 105 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 PDZK1IP1Q13113 114 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 BLMHQ13867 455 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 ZNF146Q15072 292 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 OLFML2AQ68BL7 652 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 OR8H2Q8N162 312 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 RGP1Q92546 391 aaPredicted RBP16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 SPSB1Q96BD6 273 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 Q96MT0 163 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 OPALINQ96PE5 141 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 MEGF9Q9H1U4 602 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 BEX1Q9HBH7 125 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 FGF20Q9NP95 211 aaPredicted RBP16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 INPP5EQ9NRR6 644 aa16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 SMPD3Q9NY59 655 aaPredicted RBP16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 CAB39Q9Y376 341 aaPredicted RBP16.11■□□□□ 0.17
PDZRN3-202ENST00000308537 MEX3AA1L020 520 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms