RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 NPIPA3F8WFD2 350 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 TNFSF11O14788 317 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 IGHV3-9P01782 118 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 LCATP04180 440 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 ZNF468Q5VIY5 522 aaPredicted RBP14.43□□□□□ -0.1
SSH3-201ENST00000308127 FBXW12Q6X9E4 464 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 FBXL14Q8N1E6 418 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 SPACA9Q96E40 222 aaPredicted RBP14.43□□□□□ -0.1
SSH3-201ENST00000308127 MMP24Q9Y5R2 645 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 IGKV1-12A0A0C4DH73 117 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 FAM24AA6NFZ4 105 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 ZNF727A8MUV8 499 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 IGKV1D-12P01611 117 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 FABP1P07148 127 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 CTSDP07339 412 aaPredicted RBP14.43□□□□□ -0.1
SSH3-201ENST00000308127 JMJD7P0C870 316 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 CCL3P10147 92 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 NELFAQ9H3P2 528 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 SLC2A9Q9NRM0 540 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 C19orf12Q9NSK7 152 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 FAM212BQ9NTI7 297 aaPredicted RBP14.43□□□□□ -0.1
SSH3-201ENST00000308127 P4HTMQ9NXG6 502 aa14.43□□□□□ -0.1
SSH3-201ENST00000308127 TLX3O43711 291 aaPredicted RBP14.42□□□□□ -0.1
SSH3-201ENST00000308127 F10P00742 488 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 B4GALT1P15291 398 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 HIST3H3Q16695 136 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 ZFP62Q8NB50 900 aaPredicted RBP14.42□□□□□ -0.1
SSH3-201ENST00000308127 NABP1Q96AH0 204 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 ULBP2Q9BZM5 246 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 URGCP-MRPS24S4R325 110 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 C5orf52A6NGY3 159 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 NTF4P34130 210 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 TMEM187Q14656 261 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 OPN5Q6U736 354 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 Q6ZPA2 131 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 OR5L2Q8NGL0 311 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 GSN-AS1Q9NRJ2 163 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 KPTNQ9Y664 436 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 TRIOBPQ9H2D6 2365 aa14.42□□□□□ -0.1
SSH3-201ENST00000308127 DHHO43323 396 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 CD63P08962 238 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 IGSF11Q5DX21 431 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 SKA3Q8IX90 412 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 TMEM217Q8N7C4 229 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 OR10AD1Q8NGE0 317 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 NAA60Q9H7X0 242 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 TUBD1Q9UJT1 453 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 A0A1W2PQM1 296 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 IFNA4P05014 189 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 SULT1A1P50225 295 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 C15orf54Q8N8G6 183 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 TP53RKQ96S44 253 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 SCRT1Q9BWW7 348 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 OCIAD1Q9NX40 245 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 KCNIP3Q9Y2W7 256 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 STARD10Q9Y365 291 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 MTCH2Q9Y6C9 303 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 CHCHD2Q9Y6H1 151 aaPredicted RBP14.41□□□□□ -0.1
SSH3-201ENST00000308127 V9GYS6 101 aa14.41□□□□□ -0.1
SSH3-201ENST00000308127 S100A9P06702 114 aaKnown RBP14.4□□□□□ -0.1
SSH3-201ENST00000308127 POLR2GP62487 172 aaKnown RBP eCLIP14.4□□□□□ -0.1
SSH3-201ENST00000308127 HAGHQ16775 308 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 NSUN5P2Q63ZY6 315 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 P4HA3Q7Z4N8 544 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 SLC35G3Q8N808 338 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 TM2D1Q9BX74 207 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 CST7O76096 145 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 DANCRP0C864 163 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 RAB5AP20339 215 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 CCL7P80098 99 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 FAM209BQ5JX69 171 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 ZNF343Q6P1L6 599 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 ZNF565Q8N9K5 539 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 UBAC2Q8NBM4 344 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 FGFBP3Q8TAT2 258 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 METTL9Q9H1A3 318 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 DSPP15924 2871 aaKnown RBP14.4□□□□□ -0.1
SSH3-201ENST00000308127 E5RGE8 158 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 BCAT2O15382 392 aaPredicted RBP14.4□□□□□ -0.1
SSH3-201ENST00000308127 YIF1AO95070 293 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 SLC35A1P78382 337 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 FAM3AP98173 230 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 C9orf135Q5VTT2 229 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 SRXN1Q9BYN0 137 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 TGIF2Q9GZN2 237 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 CRLF2Q9HC73 371 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 KCNJ16Q9NPI9 418 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 NECAP2Q9NVZ3 263 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 MIOXQ9UGB7 285 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 NSG2Q9Y328 171 aa14.4□□□□□ -0.1
SSH3-201ENST00000308127 NKX2-6A6NCS4 301 aa14.39□□□□□ -0.11
SSH3-201ENST00000308127 OR7C1O76099 320 aaPredicted RBP14.39□□□□□ -0.11
SSH3-201ENST00000308127 OR8U8P0C7N1 319 aa14.39□□□□□ -0.11
SSH3-201ENST00000308127 AADACP22760 399 aa14.39□□□□□ -0.11
SSH3-201ENST00000308127 ZNF84P51523 738 aa14.39□□□□□ -0.11
SSH3-201ENST00000308127 RUNX1Q01196 453 aa14.39□□□□□ -0.11
SSH3-201ENST00000308127 SLC25A53Q5H9E4 307 aa14.39□□□□□ -0.11
SSH3-201ENST00000308127 SPIN3Q5JUX0 258 aa14.39□□□□□ -0.11
SSH3-201ENST00000308127 MYPOPQ86VE0 399 aaPredicted RBP14.39□□□□□ -0.11
SSH3-201ENST00000308127 PP6455Q8WZ26 134 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms