RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FBXL17Q9UF56 701 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 LOXL2Q9Y4K0 774 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 DDX60LQ5H9U9 1706 aaKnown RBP11.27□□□□□ -0.61
USP38-201ENST00000307017 KISS1Q15726 138 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 RNF212Q495C1 297 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 CST9Q5W186 159 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 OR4D9Q8NGE8 314 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 LYRM4Q9HD34 91 aa11.27□□□□□ -0.61
USP38-201ENST00000307017 MMP15P51511 669 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 OR11H7Q8NGC8 314 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 MRGPRX1Q96LB2 322 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 ZFC3H1O60293 1989 aaKnown RBP11.26□□□□□ -0.61
USP38-201ENST00000307017 EXT1Q16394 746 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 TNXAQ16473 311 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 ATOH7Q8N100 152 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 SPICQ8N5J4 248 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 TMEM229BQ8NBD8 167 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 TMEFF2Q9UIK5 374 aaPredicted RBP11.26□□□□□ -0.61
USP38-201ENST00000307017 TCRBV5S1A1TA0A578 114 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 HMGA1P17096 107 aaKnown RBP11.26□□□□□ -0.61
USP38-201ENST00000307017 TMEM183BQ1AE95 376 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 ZNF784Q8NCA9 323 aaPredicted RBP11.26□□□□□ -0.61
USP38-201ENST00000307017 ZNF485Q8NCK3 441 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 OR10G4Q8NGN3 311 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 OR10G9Q8NGN4 311 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 OR10G7Q8NGN6 311 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 SPPL3Q8TCT6 385 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 FOXC2Q99958 501 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 IL2RAP01589 272 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 SPP1P10451 314 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 GALNSP34059 522 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 FDX2Q6P4F2 183 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 RNF165Q6ZSG1 346 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 TSPAN32Q96QS1 320 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 TBX15Q96SF7 602 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 LAT2Q9GZY6 243 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 SERGEFQ9UGK8 458 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 WSB1Q9Y6I7 421 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 ADAM11O75078 769 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 ARR3P36575 388 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 IER3P46695 156 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 TFPI2P48307 235 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 TMEM52BQ4KMG9 183 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 SIGIRRQ6IA17 410 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 OVCH2Q7RTZ1 564 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 LRRC75AQ8NAA5 344 aa11.26□□□□□ -0.61
USP38-201ENST00000307017 LILRB1Q8NHL6 650 aaPredicted RBP11.26□□□□□ -0.61
USP38-201ENST00000307017 MAP1LC3B2A6NCE7 125 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 TOX3O15405 576 aaPredicted RBP11.25□□□□□ -0.61
USP38-201ENST00000307017 ZNF117Q03924 483 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 TBC1D26Q86UD7 250 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 CORO2AQ92828 525 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 MRPL37Q9BZE1 423 aaKnown RBP11.25□□□□□ -0.61
USP38-201ENST00000307017 MAP1LC3BQ9GZQ8 125 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 SLIRPQ9GZT3 109 aaKnown RBP11.25□□□□□ -0.61
USP38-201ENST00000307017 GSX1Q9H4S2 264 aaPredicted RBP11.25□□□□□ -0.61
USP38-201ENST00000307017 SCGB1D4Q6XE38 83 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 OR4C3Q8NH37 302 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 AAMDCQ9H7C9 122 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 A0A087WUJ7 227 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 AP4M1O00189 453 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 SOCS1O15524 211 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 FZD6O60353 706 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 NGFP01138 241 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 LYRM7Q5U5X0 104 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 GUSBP11Q6P575 273 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 GFRALQ6UXV0 394 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 OR4P4Q8NGL7 312 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 COA4Q9NYJ1 87 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 SLC17A2O00624 439 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 FBXO46Q6PJ61 603 aaPredicted RBP11.25□□□□□ -0.61
USP38-201ENST00000307017 PLA2G2FQ9BZM2 168 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 POLDIP2Q9Y2S7 368 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 ANKRD36CQ5JPF3 1778 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 ALG1L2C9J202 215 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 PRRG2O14669 202 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 LANCL1O43813 399 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 CDKN2AP42771 156 aaKnown RBP11.25□□□□□ -0.61
USP38-201ENST00000307017 MEOX2P50222 304 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 PIGYQ3MUY2 71 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 OR4C12Q96R67 309 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 KCND3Q9UK17 655 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 F11RQ9Y624 299 aaKnown RBP11.25□□□□□ -0.61
USP38-201ENST00000307017 ORM1P02763 201 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 SGK494Q96LW2 274 aa11.25□□□□□ -0.61
USP38-201ENST00000307017 PACRGQ96M98 296 aaPredicted RBP11.25□□□□□ -0.61
USP38-201ENST00000307017 TMEM128Q5BJH2 165 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 CLLU1Q5K131 121 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 ZNF793Q6ZN11 406 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 TMEM116Q8NCL8 245 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 ST6GAL2Q96JF0 529 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 ASB16Q96NS5 453 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 RPP25Q9BUL9 199 aaKnown RBP11.24□□□□□ -0.61
USP38-201ENST00000307017 IGHV3OR16-12A0A075B7B8 117 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 TRGV10A0A0A0MS01 117 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 IGKV3OR2-268A0A0C4DH90 116 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 H0YIG0 161 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 CTAG2O75638 210 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 KLHDC1Q8N7A1 406 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms