RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ELL3Q9HB65 397 aaPredicted RBP9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 RHOFQ9HBH0 211 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 HES4Q9HCC6 221 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 TCF7L1Q9HCS4 588 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 NOX4Q9NPH5 578 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 MTCH1Q9NZJ7 389 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 SLC25A10Q9UBX3 287 aaPredicted RBP9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 FOXJ3Q9UPW0 622 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 LRRC42Q9Y546 428 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 DSCAML1Q8TD84 2053 aa9.15□□□□□ -0.94
CSPG4P1Y-201ENST00000306641 IGKV1D-17A0A075B6S4 117 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TRBV5-7A0A0A0MS05 114 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 A0A1B0GW55 424 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GABRPO00591 440 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TNFRSF13BO14836 293 aaPredicted RBP9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ANGPTL7O43827 346 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 RGS9O75916 674 aaPredicted RBP9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 MAS1P04201 325 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DUX4L2P0CJ85 424 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DUX4L3P0CJ86 424 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DUX4L4P0CJ87 422 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DUX4L5P0CJ88 424 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DUX4L6P0CJ89 424 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DUX4L7P0CJ90 424 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CPEP16870 476 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 IGFBP3P17936 291 aaPredicted RBP9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PSMB9P28065 219 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GABRA5P31644 462 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TGFBR2P37173 567 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 BMXP51813 675 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SNU13P55769 128 aaKnown RBP9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 RIPPLY3P57055 190 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ERVK11-1P61568 191 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 EMX1Q04741 257 aaPredicted RBP9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SCGB2A2Q13296 93 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TPBGQ13641 420 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 C11orf91Q3C1V1 193 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 KCTD21Q4G0X4 260 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ARMCX4Q5H9R4 360 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ZNF529Q6P280 563 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ZNF773Q6PK81 442 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DUX4L9Q6RFH8 374 aaPredicted RBP9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ZNF841Q6ZN19 808 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 BTN2A1Q7KYR7 527 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 FAM58AQ8N1B3 248 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 JAGN1Q8N5M9 183 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 NKAIN3Q8N8D7 197 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 RAB40AQ8WXH6 277 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ORAI1Q96D31 301 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SLITRK2Q9H156 845 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 RBFOX1Q9NWB1 397 aaKnown RBP9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DUX4Q9UBX2 424 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 INSIG2Q9Y5U4 225 aa9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 MAP1AP78559 2803 aaPredicted RBP9.14□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TLN2Q9Y4G6 2542 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TRAV8-7A0A075B6U6 113 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GPX5O75715 221 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 KDM4BO94953 1096 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TNFAIP8O95379 198 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CSTBP04080 98 aaKnown RBP9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TFF1P04155 84 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 LIPFP07098 398 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CHRM2P08172 466 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SELLP14151 372 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PRDX2P32119 198 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 OR3A4PP47883 348 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 NPBWR2P48146 333 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 MTNR1BP49286 362 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CEBPDP49716 269 aaPredicted RBP9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CAV3P56539 151 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ZP1P60852 638 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 RPS25P62851 125 aaKnown RBP9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 RSU1Q15404 277 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DGUOKQ16854 277 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 HSD17B12Q53GQ0 312 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SPIN3Q5JUX0 258 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 METTL11BQ5VVY1 283 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ASPHD2Q6ICH7 369 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CEACAM19Q7Z692 300 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PHC2Q8IXK0 858 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SPARTQ8N0X7 666 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ASCC1Q8N9N2 400 aaKnown RBP9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ZNRF1Q8ND25 227 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PXT1Q8NFP0 134 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TMEM203Q969S6 136 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SDSLQ96GA7 329 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TMPRSS13Q9BYE2 586 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 METTL9Q9H1A3 318 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 VCX3AQ9NNX9 186 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 EXOSC4Q9NPD3 245 aaKnown RBP9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 MMP26Q9NRE1 261 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 PCDHB16Q9NRJ7 776 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ZNF222Q9UK12 451 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GSTK1Q9Y2Q3 226 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 AUP1Q9Y679 476 aa9.13□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 A0A1W2PQ09 198 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 MEGF11A6BM72 1044 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 C22orf46C9J442 243 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SH2D1BO14796 132 aa9.12□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ARL6IP5O75915 188 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms