RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 RPS25P62851 125 aaKnown RBP7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 ZNF787Q6DD87 383 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 ZNF485Q8NCK3 441 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 SMIM19Q96E16 107 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 TAS2R4Q9NYW5 299 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 IL36GQ9NZH8 169 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 NPAP1Q9NZP6 1156 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 LTBRP36941 435 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 ERVFC1-1P60608 527 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 SRSF5Q13243 272 aaKnown RBP7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 ALKAL2Q6UX46 152 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 PARP16Q8N5Y8 322 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 CCL17Q92583 94 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 RBFOX1Q9NWB1 397 aaKnown RBP7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 PSORS1C1Q9UIG5 152 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 A4GNTQ9UNA3 340 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 A0A1W2PNR3 127 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 FITM1A5D6W6 292 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 GCGP01275 180 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 OR13C7P0DN81 318 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 CD1EP15812 388 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 CCR9P51686 369 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 OR2B8PP59922 312 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 SPCS3P61009 180 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 RRN3P1Q2M238 152 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 TMEM268Q5VZI3 342 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 TIPARPQ7Z3E1 657 aaKnown RBP7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 VSTM2AQ8TAG5 236 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 SMIM12Q96EX1 92 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 VSTM2LQ96N03 204 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 AP5S1Q9NUS5 200 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 ST3GAL6Q9Y274 331 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 M6PRP20645 277 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 THBS4P35443 961 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 FABP9Q0Z7S8 132 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 SLC25A26Q70HW3 274 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 LRRTM1Q86UE6 522 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 RHOXF1Q8NHV9 184 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 FOXB1Q99853 325 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 MIEN1Q9BRT3 115 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 TNFRSF19Q9NS68 423 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 IL20Q9NYY1 176 aa7.42□□□□□ -1.22
PCDHB1-201ENST00000306549 SDCBPO00560 298 aaPredicted RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 NKX2-5P52952 324 aaPredicted RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 P2RX3P56373 397 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SLC35B1P78383 322 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 EMX1Q04741 257 aaPredicted RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 CD300LDQ6UXZ3 194 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 HINT3Q9NQE9 182 aaKnown RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 OR6C3Q9NZP0 311 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 TAAR3PQ9P1P4 343 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 NEU3Q9UQ49 428 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 EPOPA6NHQ4 379 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 TO15178 435 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 GATCO43716 136 aaKnown RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 ONECUT2O95948 504 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 IGHA2P01877 340 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SHC1P29353 583 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 TEAD3Q99594 435 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 CHST6Q9GZX3 395 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SP1P08047 785 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 LIMS3P0CW19 117 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 LIMS4P0CW20 117 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SULT1A3P0DMM9 295 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SULT1A4P0DMN0 295 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 FPR2P25090 351 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 FCGR2CP31995 323 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 PPP1CCP36873 323 aaKnown RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 RSPO4Q2I0M5 234 aaPredicted RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 VN1R4Q7Z5H5 301 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 ADTRPQ96IZ2 230 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 CXorf58Q96LI9 332 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 LURAP1Q96LR2 239 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 LRRC3BQ96PB8 259 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 HSD17B10Q99714 261 aaKnown RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 TINAGL1Q9GZM7 467 aaPredicted RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 HEXA-AS1Q9H8Q6 139 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 ZMAT3Q9HA38 289 aaKnown RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 ICAM5Q9UMF0 924 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SPI1P17947 270 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SOX8P57073 446 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 TPPP2P59282 170 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 GGNBP1Q5YKI7 109 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 BHLHA15Q7RTS1 189 aaPredicted RBP7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 GPR119Q8TDV5 335 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SFXN3Q9BWM7 321 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 POM121CA8CG34 1229 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 SERPINE3A8MV23 424 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 M0R1X1 148 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 CCL21O00585 134 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 LANCL1O43813 399 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 OR2F2O95006 317 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 B4GALT1P15291 398 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 OR2F1Q13607 317 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 CEACAM16Q2WEN9 425 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 RNF212Q495C1 297 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 FDX2Q6P4F2 183 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 BATF2Q8N1L9 274 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 OR52N4Q8NGI2 321 aa7.41□□□□□ -1.22
PCDHB1-201ENST00000306549 OR52I1Q8NGK6 324 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 256.1 ms