RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 C17orf98A8MV24 154 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 POLR2IP36954 125 aaKnown RBP13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 KIR2DS4P43632 304 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 RBP2P50120 134 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 DEFA6Q01524 100 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 COL10A1Q03692 680 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 MEF2CQ06413 473 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 ZNF273Q14593 569 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 SLC35E4Q6ICL7 350 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 OR8H2Q8N162 312 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 MRPL48Q96GC5 212 aaKnown RBP13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 AJUBAQ96IF1 538 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 HRASLS5Q96KN8 279 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 SNX22Q96L94 193 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 CDCA4Q9BXL8 241 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 MTCH1Q9NZJ7 389 aa13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 TBL2Q9Y4P3 447 aaKnown RBP13.55□□□□□ -0.24
TRAPPC1-201ENST00000303731 SAC3D1A6NKF1 404 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 VGLL3A8MV65 326 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 ZNF737O75373 536 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 APOL3O95236 402 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 ISG15P05161 165 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 ALPLP05186 524 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 RPSAP08865 295 aaKnown RBP13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 ZNF728P0DKX0 622 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 CCL3L1P16619 93 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 PRKACBP22694 351 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 ATP1B3P54709 279 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 PDLIM3Q53GG5 364 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 ZFP1Q6P2D0 407 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 SLC25A26Q70HW3 274 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 UTS2BQ765I0 119 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 EGFL6Q8IUX8 553 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 PRSS35Q8N3Z0 413 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 NPFFR1Q9GZQ6 430 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 GLS2Q9UI32 602 aa13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 TET2Q6N021 2002 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC1-201ENST00000303731 IGKV1-27A0A075B6S5 117 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 hADV38S2A0JD32 116 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 FAM90A8PA6NJQ4 464 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 COX7A1P24310 79 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 PEX2P28328 305 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 DLX6P56179 175 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 EDDM3BP56851 147 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 SNRPGP62308 76 aaKnown RBP13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 ZNF85Q03923 595 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 TP53I3Q53FA7 332 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 FDX2Q6P4F2 183 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 CRIP3Q6Q6R5 217 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 Q6ZTK2 550 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 LHFPL2Q6ZUX7 228 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 C10orf67Q8IYJ2 551 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 BATF2Q8N1L9 274 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 OR2G2Q8NGZ5 317 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 OR2T6Q8NHC8 308 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 PPP1R35Q8TAP8 253 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 C17orf50Q8WW18 174 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 EMG1Q92979 244 aaKnown RBP13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 SLAMF9Q96A28 289 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 SPSB1Q96BD6 273 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 MALSU1Q96EH3 234 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 ZNF714Q96N38 554 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 NEK6Q9HC98 313 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 PITPNC1Q9UKF7 332 aa13.53□□□□□ -0.24
TRAPPC1-201ENST00000303731 TRBV2A0A0J9YWF9 115 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 DAPL1A0PJW8 107 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 PIPP12273 146 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 ZNF20P17024 532 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 KIR3DL2P43630 455 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 ALDH3A2P51648 485 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 CCR9P51686 369 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 BMXP51813 675 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 ACTA2P62736 377 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 ACTG2P63267 376 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 HERPUD1Q15011 391 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 LY6EQ16553 131 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 SPIN3Q5JUX0 258 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 ZNF782Q6ZMW2 699 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 OR11H6Q8NGC7 330 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 PYDC1Q8WXC3 89 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 RNFT2Q96EX2 444 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 RHOFQ9HBH0 211 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 ABCB10Q9NRK6 738 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 LINC00312Q9Y6C7 94 aa13.52□□□□□ -0.25
TRAPPC1-201ENST00000303731 ODF3BA8MYP8 253 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 H3BSH0 61 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 J3QRE1 110 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 SLC16A6O15403 523 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 ENTPD6O75354 484 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 HAND1O96004 215 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 ARG1P05089 322 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 HTR1AP08908 422 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 OCM2P0CE71 109 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 OCMP0CE72 109 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 IGHV1-8P0DP01 117 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 EFNB2P52799 333 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 MTCP1P56278 107 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 ZNF146Q15072 292 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 ZNF626Q68DY1 528 aa13.51□□□□□ -0.25
TRAPPC1-201ENST00000303731 ZBTB49Q6ZSB9 765 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms