RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 AWAT2Q6E213 333 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 SIGIRRQ6IA17 410 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 Q6P435 159 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 LRRC28Q86X40 367 aaPredicted RBP7.93□□□□□ -1.14
RFX3-201ENST00000302303 FAM89BQ8N5H3 189 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 CD177Q8N6Q3 437 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 OR5T2Q8NGG2 359 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 ANGPTL6Q8NI99 470 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 C10orf105Q8TEF2 133 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 SLC25A38Q96DW6 304 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 FAM192AQ9GZU8 254 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 LPAR5Q9H1C0 372 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 BANF2Q9H503 90 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 CHODLQ9H9P2 273 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 PLGRKTQ9HBL7 147 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 NEK6Q9HC98 313 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 GHRLQ9UBU3 117 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 POLDIP2Q9Y2S7 368 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 WIPI2Q9Y4P8 454 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 NPTNQ9Y639 398 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 ARID1AO14497 2285 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 IGHV4-30-2A0A087WSY4 118 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 A0A1B0GW55 424 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 hCG_1807616A0A1W2PRN6 198 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 TRAPPC2LH3BP13 241 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 IFNL4K9M1U5 179 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 BPNT1O95861 308 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 DUX4L2P0CJ85 424 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 DUX4L3P0CJ86 424 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 DUX4L4P0CJ87 422 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 DUX4L5P0CJ88 424 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 DUX4L6P0CJ89 424 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 DUX4L7P0CJ90 424 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 ARSBP15848 533 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 GLRA1P23415 457 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 DUSP1P28562 367 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 RORCP51449 518 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 TMEM50BP56557 158 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 GMFBP60983 142 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 ZNF146Q15072 292 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 PDCD1Q15116 288 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 PIGYQ3MUY2 71 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 NHLRC3Q5JS37 347 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 STUMQ69YW2 141 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 DUX4L9Q6RFH8 374 aaPredicted RBP7.93□□□□□ -1.14
RFX3-201ENST00000302303 LYPD2Q6UXB3 125 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 CDH24Q86UP0 819 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 FAM58AQ8N1B3 248 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 PNLDC1Q8NA58 520 aaKnown RBP7.93□□□□□ -1.14
RFX3-201ENST00000302303 FAM46BQ96A09 425 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 CPNE2Q96FN4 548 aaPredicted RBP7.93□□□□□ -1.14
RFX3-201ENST00000302303 Q96M66 194 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 TMEM246Q9BRR3 403 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 NICN1Q9BSH3 213 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 DCUN1D5Q9BTE7 237 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 TM2D1Q9BX74 207 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 METTL9Q9H1A3 318 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 MIXL1Q9H2W2 232 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 SEBOXQ9HB31 216 aaPredicted RBP7.93□□□□□ -1.14
RFX3-201ENST00000302303 RHOFQ9HBH0 211 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 RASL12Q9NYN1 266 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 CCDC59Q9P031 241 aaKnown RBP7.93□□□□□ -1.14
RFX3-201ENST00000302303 DUX4Q9UBX2 424 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 SPATA2Q9UM82 520 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 MAB21L2Q9Y586 359 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 ZNF469Q96JG9 3925 aaPredicted RBP7.92□□□□□ -1.14
RFX3-201ENST00000302303 ANKRD17O75179 2603 aaKnown RBP7.92□□□□□ -1.14
RFX3-201ENST00000302303 PPIAL4EA0A075B759 164 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 OOEPA6NGQ2 149 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 RFPL4AA6NLU0 287 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 PPIAL4DF5H284 164 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 RFPL4AL1F8VTS6 287 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 LGALS8O00214 317 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 CTDSP2O14595 271 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 TMEM127O75204 238 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 NXPH2O95156 264 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 HTR3BO95264 441 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 UBBP0CG47 229 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 PPIAL4FP0DN26 164 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 MGMTP16455 207 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 SERPINA2P20848 420 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 LMO1P25800 156 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 CEBPDP49716 269 aaPredicted RBP7.92□□□□□ -1.14
RFX3-201ENST00000302303 RBM11P57052 281 aaKnown RBP7.92□□□□□ -1.14
RFX3-201ENST00000302303 BTG1P62324 171 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 RPS27AP62979 156 aaKnown RBP7.92□□□□□ -1.14
RFX3-201ENST00000302303 RSU1Q15404 277 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 CNPY1Q3B7I2 92 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 MOGAT2Q3SYC2 334 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 ZNF404Q494X3 552 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 AVPI1Q5T686 147 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 ATPAF1Q5TC12 328 aaPredicted RBP7.92□□□□□ -1.14
RFX3-201ENST00000302303 ZNF841Q6ZN19 808 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 OR2W3Q7Z3T1 314 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 CROCCP3Q8IVE0 287 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 OSR2Q8N2R0 312 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 BOLLQ8N9W6 283 aaKnown RBP7.92□□□□□ -1.14
RFX3-201ENST00000302303 DEFB108BQ8NET1 73 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 OR11L1Q8NGX0 322 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 LGALS14Q8TCE9 139 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms