RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZBTB25P24278 435 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 GALNSP34059 522 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 NPBWR1P48145 328 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 ABHD17BQ5VST6 288 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 SDSLQ96GA7 329 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 PRRX2Q99811 253 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 PIGQQ9BRB3 760 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 G6PC2Q9NQR9 355 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 TRAPPC2LH3BP13 241 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 IGKV3-11P04433 115 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 CD37P11049 281 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 NDUFA6P56556 154 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 ECH1Q13011 328 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 PIGYQ3MUY2 71 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 EIF4E3Q8N5X7 224 aaKnown RBP12.35□□□□□ -0.43
SDC2-201ENST00000302190 BMPERQ8N8U9 685 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 CPNE4Q96A23 557 aaPredicted RBP12.35□□□□□ -0.43
SDC2-201ENST00000302190 PIK3IP1Q96FE7 263 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 DMRTA2Q96SC8 542 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 ACACAQ13085 2346 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 CDRT15L2A8MXV6 281 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 ZNF32P17041 273 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 ROM1Q03395 351 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 TESK1Q15569 626 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 TRIM61Q5EBN2 209 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 ACER2Q5QJU3 275 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 DEGS2Q6QHC5 323 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 SLC25A45Q8N413 288 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 SLC30A7Q8NEW0 376 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 ZNF519Q8TB69 540 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 PSMF1Q92530 271 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 HAS2Q92819 552 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 P4HTMQ9NXG6 502 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 RCL1Q9Y2P8 373 aaKnown RBP12.35□□□□□ -0.43
SDC2-201ENST00000302190 CADP27708 2225 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 C5orf49A4QMS7 147 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 GEMIN2O14893 280 aaKnown RBP12.34□□□□□ -0.43
SDC2-201ENST00000302190 LAMTOR5O43504 91 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 WDR1O75083 606 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 JTBO76095 146 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 NKX2-1P43699 371 aaPredicted RBP12.34□□□□□ -0.43
SDC2-201ENST00000302190 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.34□□□□□ -0.43
SDC2-201ENST00000302190 LYZL2Q7Z4W2 148 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 ZSCAN4Q8NAM6 433 aaPredicted RBP12.34□□□□□ -0.43
SDC2-201ENST00000302190 KIRREL1Q96J84 757 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 LHFPL6Q9Y693 200 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 MSTNO14793 375 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 HMGB3O15347 200 aaKnown RBP12.34□□□□□ -0.43
SDC2-201ENST00000302190 CCL3P10147 92 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 MPGP29372 298 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 FHITP49789 147 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 ELLP55199 621 aaPredicted RBP12.34□□□□□ -0.43
SDC2-201ENST00000302190 SCAND1P57086 179 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 LY6G6FQ5SQ64 297 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 RPUSD3Q6P087 351 aaKnown RBP12.34□□□□□ -0.43
SDC2-201ENST00000302190 LGI3Q8N145 548 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 SLC25A43Q8WUT9 341 aaPredicted RBP12.34□□□□□ -0.43
SDC2-201ENST00000302190 MFRPQ9BY79 579 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 MED13LQ71F56 2210 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 FAM24AA6NFZ4 105 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 ARGFXA6NJG6 315 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 ANKRD55Q3KP44 614 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 TMEM164Q5U3C3 297 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 AADACL3Q5VUY0 350 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 ETV3LQ6ZN32 361 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 DUSP23Q9BVJ7 150 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 FAM234AQ9H0X4 552 aa12.34□□□□□ -0.43
SDC2-201ENST00000302190 ZNF729A6NN14 1252 aaPredicted RBP12.33□□□□□ -0.43
SDC2-201ENST00000302190 ZNF724A8MTY0 619 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 PATE3B3GLJ2 98 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 SLC34A2O95436 690 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 CD1AP06126 327 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 FPR2P25090 351 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 TAGLN2P37802 199 aaKnown RBP12.33□□□□□ -0.43
SDC2-201ENST00000302190 OR8G2PQ6IF36 304 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 PRSS54Q6PEW0 395 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 UQCC3Q6UW78 93 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 DPPA2Q7Z7J5 298 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 OR11L1Q8NGX0 322 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 IFI44Q8TCB0 444 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 CPT1CQ8TCG5 803 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 MEGF10Q96KG7 1140 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 RAB33BQ9H082 229 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 BCO1Q9HAY6 547 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 NPTNQ9Y639 398 aa12.33□□□□□ -0.43
SDC2-201ENST00000302190 hCG_1809904A0A1W2PP81 198 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 A0A1W2PR64 198 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 A0A1W2PRV1 198 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 H7C1Q1 480 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 HOXC12P31275 282 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 RHBDD2Q6NTF9 364 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 PLPP5Q8NEB5 264 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 RPS4Y2Q8TD47 263 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 EDAQ92838 391 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 ZNF501Q96CX3 271 aaPredicted RBP12.33□□□□□ -0.44
SDC2-201ENST00000302190 KCNK17Q96T54 332 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 PECRQ9BY49 303 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 C5orf66Q9H5L9 145 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 MOB1AQ9H8S9 216 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms