RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 SYNGR1O43759 233 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 PPP3CBP16298 524 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 NAT1P18440 290 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 CHATP28329 748 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 GLRXP35754 106 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 ACTBL2Q562R1 376 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 SIGIRRQ6IA17 410 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 TMEM108Q6UXF1 575 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 SPERTQ8NA61 448 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 OR10AD1Q8NGE0 317 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 TINAGL1Q9GZM7 467 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 FZR1Q9UM11 496 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 PRAF2O60831 178 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 PDCD6O75340 191 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 OR7C1O76099 320 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 CD40P25942 277 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 MZT1Q08AG7 82 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 MPV17LQ2QL34 196 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 OR52W1Q6IF63 320 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 LINC00596Q86U02 117 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 Q8IYB0 196 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 BPIFB2Q8N4F0 458 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 OR13G1Q8NGZ3 307 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 OR4K15Q8NH41 348 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 EMG1Q92979 244 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 FBXW5Q969U6 566 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 PRRT1Q99946 306 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 GINS4Q9BRT9 223 aa13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 NPDC1Q9NQX5 325 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-201ENST00000300302 ARPC1BO15143 372 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 CCNKO75909 580 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 IFNA6P05013 189 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 ZNF250P15622 560 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 FUT3P21217 361 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 PTAFRP25105 342 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 HRH1P35367 487 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 ASCL1P50553 236 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 NKX6-1P78426 367 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 ZMYND11Q15326 602 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 ST3GAL2Q16842 350 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 SEZ6L2Q6UXD5 910 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 HOGA1Q86XE5 327 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 BATF2Q8N1L9 274 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 SCCPDHQ8NBX0 429 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 RADILQ96JH8 1075 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 SLC25A21Q9BQT8 299 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 FAAP24Q9BTP7 215 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 ST6GALNAC5Q9BVH7 336 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 CXXC4Q9H2H0 198 aa13.39□□□□□ -0.27
HERPUD1-201ENST00000300302 A0A0A6YYJ9 748 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 C7orf66A4D0T2 115 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 CHRNB4P30926 498 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 PMELP40967 661 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 IDO2Q6ZQW0 420 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 C22orf34Q6ZV56 151 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 WFDC8Q8IUA0 241 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 GIMAP1Q8WWP7 306 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 SNAPC3Q92966 411 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 NGBQ9NPG2 151 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 SLC2A8Q9NY64 477 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 COQ3Q9NZJ6 369 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 DUSP13Q9UII6 198 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 FLVCR2Q9UPI3 526 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 ATP6V1G2-DDX39BF2Z307 99 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 F8VVB4 439 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 F8VWA3 439 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 H0YL77 283 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 MLNRO43193 412 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 IGHV3-13P01766 116 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 PRKACAP17612 351 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 AMY2BP19961 511 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 SNU13P55769 128 aaKnown RBP13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 KLF3P57682 345 aaPredicted RBP13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 TAS2R46P59540 309 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 SELENOVP59797 346 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 ZNF154Q13106 437 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 ATAD3CQ5T2N8 411 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 WDR86Q86TI4 376 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 FAM58AQ8N1B3 248 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 BEST4Q8NFU0 473 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 DACT3Q96B18 629 aaPredicted RBP13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 CMSS1Q9BQ75 279 aaKnown RBP13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 SULT4A1Q9BR01 284 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 SPACA1Q9HBV2 294 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 ZNF701Q9NV72 531 aaPredicted RBP13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 AK3Q9UIJ7 227 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 POU2F3Q9UKI9 436 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 EDARQ9UNE0 448 aa13.38□□□□□ -0.27
HERPUD1-201ENST00000300302 HEATR1Q9H583 2144 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 RHBDL1O75783 438 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 CSN2P05814 226 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 GRPP07492 148 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 ZNF735P0CB33 412 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 MECP2P51608 486 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 RRAS2P62070 204 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 NKPD1Q17RQ9 610 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 SCGB2B2Q4G0G5 96 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 METTL11BQ5VVY1 283 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 OR5H2Q8NGV7 314 aa13.37□□□□□ -0.27
HERPUD1-201ENST00000300302 SLC6A7Q99884 636 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms