RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 RNASE12Q5GAN4 147 aaKnown RBP17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 WDR82Q6UXN9 313 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 ZNF826PQ6ZT77 177 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 LYSMD2Q8IV50 215 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM58AQ8N1B3 248 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 MS4A5Q9H3V2 200 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 FN3KRPQ9HA64 309 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 C1orf123Q9NWV4 160 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 FOXI3A8MTJ6 420 aaPredicted RBP17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 PRSS44E7EML9 344 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 NOS1APO75052 506 aaPredicted RBP17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 CD55P08174 381 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 HIST1H1DP16402 221 aaKnown RBP17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 ERVK11-1P61568 191 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 SRSF1Q07955 248 aaKnown RBP eCLIP17.54■□□□□ 0.47e-7■□□□□ 10.4
PACSIN3-201ENST00000298838 MST1LQ2TV78 715 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 Q6ZTK2 550 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 POC1AQ8NBT0 407 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 FCAMRQ8WWV6 532 aa17.54■□□□□ 0.4
PACSIN3-201ENST00000298838 A0A1W2PQ09 198 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A10PA6NDY2 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A18PA6NE21 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A16PA6NEW6 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A20PA6NIJ5 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A8PA6NJQ4 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A7PA6NKC0 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A22PA8MWA6 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A12PA8MX19 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A5PA8MXJ8 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A23PA8MXZ1 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A15PP0C7V4 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A13PP0C7W8 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A14PP0C7W9 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM90A24PP0C7X0 464 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 GNB3P16520 340 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 PRSS3P35030 304 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 INPP1P49441 399 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 TMEM50BP56557 158 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 SNRPD2P62316 118 aaKnown RBP17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 SCN1BQ07699 218 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 ARL6IP1Q15041 203 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 ZNF260Q3ZCT1 412 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 CDNFQ49AH0 187 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 PLAC9Q5JTB6 97 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 FAM209AQ5JX71 171 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 C19orf18Q8NEA5 215 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 YIPF5Q969M3 257 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 TRIM63Q969Q1 353 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 ARHGAP5-AS1Q96IT6 56 aa17.53■□□□□ 0.4
PACSIN3-201ENST00000298838 CACNA1DQ01668 2161 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 ISPDA4D126 451 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 TMEM235A6NFC5 223 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 A6NNC1 897 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 NXPH2O95156 264 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 GSTP1P09211 210 aaKnown RBP17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 CD3GP09693 182 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 SNU13P55769 128 aaKnown RBP17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 TESK1Q15569 626 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 SWI5Q1ZZU3 235 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 SPRNQ5BIV9 151 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 LINC00596Q86U02 117 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 OR52I2Q8NH67 350 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 FAIMQ9NVQ4 179 aa17.52■□□□□ 0.4
PACSIN3-201ENST00000298838 COL12A1Q99715 3063 aa17.52■□□□□ 0.39
PACSIN3-201ENST00000298838 MEIOCA2RUB1 952 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 TPD52L2O43399 206 aaKnown RBP17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 OR7C1O76099 320 aaPredicted RBP17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 GOSR1O95249 250 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 TNFRSF1AP19438 455 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 NKAPLQ5M9Q1 402 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 FIP1L1Q6UN15 594 aaKnown RBP17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 MOGAT3Q86VF5 341 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 OR10Z1Q8NGY1 313 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 ERGIC1Q969X5 290 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 NEDD4LQ96PU5 975 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 SCPEP1Q9HB40 452 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 PLEKHJ1Q9NW61 149 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 ARFGEF3Q5TH69 2177 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 MFNGO00587 321 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 HS3ST1O14792 307 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 GMFBP60983 142 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 CCL8P80075 99 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 MPV17LQ2QL34 196 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 PCGF3Q3KNV8 242 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 HACD4Q5VWC8 232 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 SIGIRRQ6IA17 410 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 ZCCHC24Q8N2G6 241 aaKnown RBP17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 LRRC29Q8WV35 223 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 SPOCK3Q9BQ16 436 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 EGLN1Q9GZT9 426 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 DECR2Q9NUI1 292 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 IL36RNQ9UBH0 155 aa17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 SPTAN1Q13813 2472 aaKnown RBP17.51■□□□□ 0.39
PACSIN3-201ENST00000298838 SULT1C2O00338 296 aa17.5■□□□□ 0.39
PACSIN3-201ENST00000298838 LPLP06858 475 aa17.5■□□□□ 0.39
PACSIN3-201ENST00000298838 MELTFP08582 738 aa17.5■□□□□ 0.39
PACSIN3-201ENST00000298838 CFHR2P36980 270 aa17.5■□□□□ 0.39
PACSIN3-201ENST00000298838 DEFA1P59665 94 aa17.5■□□□□ 0.39
PACSIN3-201ENST00000298838 DEFA3P59666 94 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms