RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 GABARAPH6UMI1 98 aa20.82■□□□□ 0.92
GTF2A1-201ENST00000298173 SRP9P49458 86 aaKnown RBP20.82■□□□□ 0.92
GTF2A1-201ENST00000298173 CDNFQ49AH0 187 aa20.82■□□□□ 0.92
GTF2A1-201ENST00000298173 Q8IYB0 196 aa20.82■□□□□ 0.92
GTF2A1-201ENST00000298173 POC1AQ8NBT0 407 aa20.82■□□□□ 0.92
GTF2A1-201ENST00000298173 ITLN1Q8WWA0 313 aa20.82■□□□□ 0.92
GTF2A1-201ENST00000298173 GCDHQ92947 438 aaPredicted RBP20.82■□□□□ 0.92
GTF2A1-201ENST00000298173 TRIM63Q969Q1 353 aa20.82■□□□□ 0.92
GTF2A1-201ENST00000298173 ZMAT3Q9HA38 289 aaKnown RBP20.82■□□□□ 0.92
GTF2A1-201ENST00000298173 CACNA1DQ01668 2161 aa20.82■□□□□ 0.92
GTF2A1-201ENST00000298173 MEIOCA2RUB1 952 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 CLEC18AA5D8T8 446 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 GEMIN2O14893 280 aaKnown RBP20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 LANCL1O43813 399 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 BLVRBP30043 206 aaPredicted RBP20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 TNFAIP6P98066 277 aaPredicted RBP20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 CLEC18BQ6UXF7 455 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 MEX3BQ6ZN04 569 aaKnown RBP20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 RTN4RL2Q86UN3 420 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM58AQ8N1B3 248 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 MUC15Q8N387 334 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 CLEC18CQ8NCF0 446 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 CHST4Q8NCG5 386 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 RAB3CQ96E17 227 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 HES4Q9HCC6 221 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 UFSP2Q9NUQ7 469 aa20.81■□□□□ 0.92
GTF2A1-201ENST00000298173 A0A1W2PPR1 153 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A10PA6NDY2 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A18PA6NE21 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A16PA6NEW6 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A20PA6NIJ5 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A8PA6NJQ4 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A7PA6NKC0 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A22PA8MWA6 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A12PA8MX19 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A5PA8MXJ8 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A23PA8MXZ1 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A15PP0C7V4 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A13PP0C7W8 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A14PP0C7W9 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM90A24PP0C7X0 464 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 TNFSF4P23510 183 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 PMELP40967 661 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 Q6ZTK2 550 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 OR52I2Q8NH67 350 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 ARHGAP5-AS1Q96IT6 56 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 SPOCK3Q9BQ16 436 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 MS4A5Q9H3V2 200 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 ZNF581Q9P0T4 197 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 ELF5Q9UKW6 265 aaPredicted RBP20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 RBMX2Q9Y388 322 aaKnown RBP20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 A0A1W2PQ09 198 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 A6NLC8 198 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 C3orf80F5H4A9 247 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 MFNGO00587 321 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 HIST1H1DP16402 221 aaKnown RBP20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 GNB3P16520 340 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 GABRR1P24046 479 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 PRSS3P35030 304 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 ZCCHC24Q8N2G6 241 aaKnown RBP20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 OR10Z1Q8NGY1 313 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 C1orf123Q9NWV4 160 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 IL36RNQ9UBH0 155 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 HSF4Q9ULV5 492 aa20.8■□□□□ 0.92
GTF2A1-201ENST00000298173 ISPDA4D126 451 aa20.79■□□□□ 0.92
GTF2A1-201ENST00000298173 A6NNC1 897 aa20.79■□□□□ 0.92
GTF2A1-201ENST00000298173 GSTP1P09211 210 aaKnown RBP20.79■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM209AQ5JX71 171 aa20.79■□□□□ 0.92
GTF2A1-201ENST00000298173 GPX8Q8TED1 209 aa20.79■□□□□ 0.92
GTF2A1-201ENST00000298173 FCAMRQ8WWV6 532 aa20.79■□□□□ 0.92
GTF2A1-201ENST00000298173 FBXW5Q969U6 566 aa20.79■□□□□ 0.92
GTF2A1-201ENST00000298173 ERGIC1Q969X5 290 aa20.79■□□□□ 0.92
GTF2A1-201ENST00000298173 SEH1LQ96EE3 360 aa20.79■□□□□ 0.92
GTF2A1-201ENST00000298173 CYYR1Q96J86 154 aa20.79■□□□□ 0.92
GTF2A1-201ENST00000298173 GCM1Q9NP62 436 aa20.79■□□□□ 0.92
GTF2A1-201ENST00000298173 FAM221AA4D161 298 aa20.78■□□□□ 0.92
GTF2A1-201ENST00000298173 TMEM235A6NFC5 223 aa20.78■□□□□ 0.92
GTF2A1-201ENST00000298173 SULT1C2O00338 296 aa20.78■□□□□ 0.92
GTF2A1-201ENST00000298173 CD3GP09693 182 aa20.78■□□□□ 0.92
GTF2A1-201ENST00000298173 PRKACAP17612 351 aa20.78■□□□□ 0.92
GTF2A1-201ENST00000298173 ST8SIA4Q92187 359 aa20.78■□□□□ 0.92
GTF2A1-201ENST00000298173 EMG1Q92979 244 aaKnown RBP20.78■□□□□ 0.92
GTF2A1-201ENST00000298173 PECRQ9BY49 303 aa20.78■□□□□ 0.92
GTF2A1-201ENST00000298173 FN3KRPQ9HA64 309 aa20.78■□□□□ 0.92
GTF2A1-201ENST00000298173 ORC5O43913 435 aa20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 GOSR1O95249 250 aa20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 LHBP01229 141 aa20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 CHATP28329 748 aa20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 SCN1BQ07699 218 aa20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 IL13RA2Q14627 380 aa20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 OLFML2AQ68BL7 652 aa20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 LINC00596Q86U02 117 aa20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 MOGAT3Q86VF5 341 aa20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 SCPEP1Q9HB40 452 aa20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 KLK11Q9UBX7 282 aa20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 SPTAN1Q13813 2472 aaKnown RBP20.77■□□□□ 0.92
GTF2A1-201ENST00000298173 DYSFO75923 2080 aa20.77■□□□□ 0.91
GTF2A1-201ENST00000298173 HS3ST1O14792 307 aa20.77■□□□□ 0.91
GTF2A1-201ENST00000298173 PLA2G2AP14555 144 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms