RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CCDC107Q8WV48 283 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 CLEC4MQ9H2X3 399 aaPredicted RBP18.32■□□□□ 0.52
SOX17-201ENST00000297316 ASF1BQ9NVP2 202 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 AUP1Q9Y679 476 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 C1QTNF9BB2RNN3 333 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 IFNA6P05013 189 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 C1QTNF9P0C862 333 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 ZNF35P13682 527 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 SNU13P55769 128 aaKnown RBP18.32■□□□□ 0.52
SOX17-201ENST00000297316 IKZF1Q13422 519 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 ZNF474Q6S9Z5 364 aaPredicted RBP18.32■□□□□ 0.52
SOX17-201ENST00000297316 CPNE2Q96FN4 548 aaPredicted RBP18.32■□□□□ 0.52
SOX17-201ENST00000297316 PLEKHJ1Q9NW61 149 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 SH3BGRL2Q9UJC5 107 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 TINAGQ9UJW2 476 aa18.32■□□□□ 0.52
SOX17-201ENST00000297316 SERPINE3A8MV23 424 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 H3BUI4 141 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 GEMIN2O14893 280 aaKnown RBP18.31■□□□□ 0.52
SOX17-201ENST00000297316 TPD52L2O43399 206 aaKnown RBP18.31■□□□□ 0.52
SOX17-201ENST00000297316 AMY2BP19961 511 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 AP2S1P53680 142 aaPredicted RBP18.31■□□□□ 0.52
SOX17-201ENST00000297316 DAZAP2Q15038 168 aaPredicted RBP18.31■□□□□ 0.52
SOX17-201ENST00000297316 PDCD1Q15116 288 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 ZMYND11Q15326 602 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 VAX1Q5SQQ9 334 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 BRICD5Q6PL45 260 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 FBXL14Q8N1E6 418 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 MARCH1Q8TCQ1 289 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 DYRK2Q92630 601 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 FAAP24Q9BTP7 215 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 ZSCAN5BA6NJL1 495 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 CD300LBA8K4G0 201 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 NPBWR2P48146 333 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 OR2T2Q6IF00 324 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 SLC25A42Q86VD7 318 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 DOLPP1Q86YN1 238 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 ZNF611Q8N823 705 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 ZDHHC22Q8N966 263 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 PXT1Q8NFP0 134 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 OR51F2Q8NH61 342 aa18.31■□□□□ 0.52
SOX17-201ENST00000297316 EMG1Q92979 244 aaKnown RBP18.31■□□□□ 0.52
SOX17-201ENST00000297316 ATRXP46100 2492 aa18.3■□□□□ 0.52
SOX17-201ENST00000297316 PQLC2LA1A4F0 135 aa18.3■□□□□ 0.52
SOX17-201ENST00000297316 SDCBPO00560 298 aaPredicted RBP18.3■□□□□ 0.52
SOX17-201ENST00000297316 IFNA7P01567 189 aa18.3■□□□□ 0.52
SOX17-201ENST00000297316 GLI4P10075 376 aa18.3■□□□□ 0.52
SOX17-201ENST00000297316 HOXC12P31275 282 aa18.3■□□□□ 0.52
SOX17-201ENST00000297316 CBX5P45973 191 aa18.3■□□□□ 0.52
SOX17-201ENST00000297316 PPP1R1AQ13522 171 aa18.3■□□□□ 0.52
SOX17-201ENST00000297316 FTMTQ8N4E7 242 aa18.3■□□□□ 0.52
SOX17-201ENST00000297316 PCNPQ8WW12 178 aaKnown RBP18.3■□□□□ 0.52
SOX17-201ENST00000297316 CDH20Q9HBT6 801 aa18.3■□□□□ 0.52
SOX17-201ENST00000297316 RPS10-NUDT3A0A1W2PQS6 291 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 SHOXO15266 292 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 SMPD2O60906 423 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 ZBTB25P24278 435 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 GFRALQ6UXV0 394 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 SLC25A26Q70HW3 274 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 CCDC36Q8IYA8 594 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 OSR2Q8N2R0 312 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 C12orf45Q8N5I9 185 aaPredicted RBP18.29■□□□□ 0.52
SOX17-201ENST00000297316 CSNK2A3Q8NEV1 391 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 OR5H2Q8NGV7 314 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 TECTBQ96PL2 329 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 SULT4A1Q9BR01 284 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 ZNF701Q9NV72 531 aaPredicted RBP18.29■□□□□ 0.52
SOX17-201ENST00000297316 IL36GQ9NZH8 169 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 OPN4Q9UHM6 478 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 CHATP28329 748 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 PTGER4P35408 488 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 TIMP3P35625 211 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 GPM6AP51674 278 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 RAP2BP61225 183 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 LY6G6FQ5SQ64 297 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 ALKBH2Q6NS38 261 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 BHLHA15Q7RTS1 189 aaPredicted RBP18.29■□□□□ 0.52
SOX17-201ENST00000297316 C1orf162Q8NEQ5 155 aaPredicted RBP18.29■□□□□ 0.52
SOX17-201ENST00000297316 OR10AD1Q8NGE0 317 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 OR13G1Q8NGZ3 307 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 OR2J1Q9GZK6 312 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 UBQLN2Q9UHD9 624 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 AK3Q9UIJ7 227 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 SPTA1P02549 2419 aa18.29■□□□□ 0.52
SOX17-201ENST00000297316 CFDP00746 253 aaPredicted RBP18.28■□□□□ 0.52
SOX17-201ENST00000297316 IGKV3-15P01624 115 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 HLA-AP01891 365 aaKnown RBP18.28■□□□□ 0.52
SOX17-201ENST00000297316 CBR1P16152 277 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 NPY4RP50391 375 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 TSPAN5P62079 268 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 MARVELD3Q96A59 401 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 ST3GAL6Q9Y274 331 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 CA11O75493 328 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 CST4P01036 141 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 CEACAM8P31997 349 aaPredicted RBP18.28■□□□□ 0.52
SOX17-201ENST00000297316 UCNP55089 124 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 ACTBL2Q562R1 376 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 BEND4Q6ZU67 534 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 ZDHHC23Q8IYP9 409 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 TERB2Q8NHR7 220 aa18.28■□□□□ 0.52
SOX17-201ENST00000297316 HS3ST6Q96QI5 342 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms