RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 OR10K1Q8NGX5 313 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 HPSE2Q8WWQ2 592 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 RBM14Q96PK6 669 aaKnown RBP13.35□□□□□ -0.27
LSM6-201ENST00000296581 SELENOIQ9C0D9 397 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 FGF23Q9GZV9 251 aaPredicted RBP13.35□□□□□ -0.27
LSM6-201ENST00000296581 PIGMQ9H3S5 423 aa13.35□□□□□ -0.27
LSM6-201ENST00000296581 MAP1BP46821 2468 aaKnown RBP13.35□□□□□ -0.27
LSM6-201ENST00000296581 A0A0G2JNJ9 132 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 SOCS1O15524 211 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 ANXA3P12429 323 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 SERPINA2P20848 420 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 GIFP27352 417 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 RAB13P51153 203 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 UCP2P55851 309 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 KLRB1Q12918 225 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 PDZK1IP1Q13113 114 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 PCGF3Q3KNV8 242 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 TIMM23BQ5SRD1 257 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 CACNG6Q9BXT2 260 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 IL36GQ9NZH8 169 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 Q9UFV3 132 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 EDARQ9UNE0 448 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 MPC1Q9Y5U8 109 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 TLN1Q9Y490 2541 aaKnown RBP13.34□□□□□ -0.27
LSM6-201ENST00000296581 A8MXE2 369 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 LGALS8O00214 317 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 SPRY1O43609 319 aaPredicted RBP13.34□□□□□ -0.27
LSM6-201ENST00000296581 TCRBP04435 133 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 GSTP1P09211 210 aaKnown RBP13.34□□□□□ -0.27
LSM6-201ENST00000296581 CECR9P0C854 216 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 TMEM50BP56557 158 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 RBPJQ06330 500 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 TMEM255AQ5JRV8 349 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 PLAC9Q5JTB6 97 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 ELL3Q9HB65 397 aaPredicted RBP13.34□□□□□ -0.27
LSM6-201ENST00000296581 ZNF629Q9UEG4 869 aaPredicted RBP13.34□□□□□ -0.27
LSM6-201ENST00000296581 ZNF107Q9UII5 783 aaPredicted RBP13.34□□□□□ -0.27
LSM6-201ENST00000296581 NUBP2Q9Y5Y2 271 aa13.34□□□□□ -0.27
LSM6-201ENST00000296581 IGKV1-12A0A0C4DH73 117 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 RAB19A4D1S5 217 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 ANGPTL7O43827 346 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 IGKV1D-12P01611 117 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 HIST1H1DP16402 221 aaKnown RBP13.33□□□□□ -0.28
LSM6-201ENST00000296581 BTG1P62324 171 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 SPATA46Q5T0L3 261 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 RGS7BPQ6MZT1 257 aaPredicted RBP13.33□□□□□ -0.28
LSM6-201ENST00000296581 ZSCAN4Q8NAM6 433 aaPredicted RBP13.33□□□□□ -0.28
LSM6-201ENST00000296581 OR51T1Q8NGJ9 327 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 RAB3CQ96E17 227 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 CXorf58Q96LI9 332 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.33□□□□□ -0.28
LSM6-201ENST00000296581 KCNK7Q9Y2U2 307 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 NCOR2Q9Y618 2525 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 IGHV1-18A0A0C4DH31 117 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 MEIS3P1A6NDR6 274 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 FAM74A7A6NL05 159 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 ANKRD30BLA7E2S9 258 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 M0R233 179 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 RAC2P15153 192 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 GNB3P16520 340 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 CPT2P23786 658 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 CCR6P51684 374 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 RSU1Q15404 277 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 FAM74A3Q4VXF1 159 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 NHLRC3Q5JS37 347 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 OR2T2Q6IF00 324 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 MRGPRGQ86SM5 289 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 TMEM229BQ8NBD8 167 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 OR5A2Q8NGI9 324 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 SLC25A40Q8TBP6 338 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 OR5P3Q8WZ94 311 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 S100PBPQ96BU1 408 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 Q96M66 194 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 OR2J1Q9GZK6 312 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 PRORYQ9H606 182 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 GSN-AS1Q9NRJ2 163 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 MLXQ9UH92 298 aa13.33□□□□□ -0.28
LSM6-201ENST00000296581 MPTX1A8MV57 137 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 H7C2Y5 167 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 MFNGO00587 321 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 LILRA1O75019 489 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 TUBG1P23258 451 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 FAUP35544 74 aaKnown RBP13.32□□□□□ -0.28
LSM6-201ENST00000296581 ZNF124Q15973 351 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 PNLIPRP3Q17RR3 467 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 C3orf36Q3SXR2 165 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 RTN4RL2Q86UN3 420 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 FJX1Q86VR8 437 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 CALHM1Q8IU99 346 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 OR1J1Q8NGS3 322 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 ZNF436Q9C0F3 470 aaPredicted RBP13.32□□□□□ -0.28
LSM6-201ENST00000296581 TUBG2Q9NRH3 451 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 MBD2Q9UBB5 411 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 CACNA1AO00555 2505 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 HTR3BO95264 441 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 CSTBP04080 98 aaKnown RBP13.32□□□□□ -0.28
LSM6-201ENST00000296581 FGF2P09038 288 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 GTF2F2P13984 249 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 BMP5P22003 454 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 TAS2R19P59542 299 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms