RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 YBX2Q9Y2T7 364 aaKnown RBP10.46□□□□□ -0.74
SNIP1-201ENST00000296215 SHISA3A0PJX4 238 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 C11orf98E9PRG8 122 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 TFPIP10646 304 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 FUT1P19526 365 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 MPLP40238 635 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 PDE7AQ13946 482 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 C10orf91Q5T1B1 145 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 C10orf111Q8N326 155 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 TMEM174Q8WUU8 243 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 PELI1Q96FA3 418 aa10.46□□□□□ -0.74
SNIP1-201ENST00000296215 NUP214P35658 2090 aaPredicted RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 TMEM265A0A087WTH1 108 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 BLVRBP30043 206 aaPredicted RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 G6PCP35575 357 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 SNRPD1P62314 119 aaKnown RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 ZFAND6Q6FIF0 208 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 CD99L2Q8TCZ2 262 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 NMNAT3Q96T66 252 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 RNF39Q9H2S5 420 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 CXorf36Q9H7Y0 433 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 UFC1Q9Y3C8 167 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 DUOX1Q9NRD9 1551 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 SLC25A30Q5SVS4 291 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 DMKNQ6E0U4 476 aaPredicted RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 PARM1Q6UWI2 310 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 OR13C6PQ8NH95 151 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 HOXB13Q92826 284 aaPredicted RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 PCED1BQ96HM7 432 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 TIMP4Q99727 224 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 BARX1Q9HBU1 254 aaPredicted RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 NXT1Q9UKK6 140 aaKnown RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 VSIG4Q9Y279 399 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 UBR1Q8IWV7 1749 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 B5MCH6 92 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 BCAT2O15382 392 aaPredicted RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 ADRA2AP08913 450 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 OR5AL1P0C617 328 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 SPINK8P0C7L1 97 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 HOXA11P31270 313 aaPredicted RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 SLC22A24Q8N4F4 322 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 ZNRF4Q8WWF5 429 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 DAZAP1Q96EP5 407 aaKnown RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 HARBI1Q96MB7 349 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 TP53BP1Q12888 1972 aaPredicted RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 TRBV24-1A0A075B6N3 115 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 IGHV2-70DA0A0C4DH43 119 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 PSEN2P49810 448 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 GAGE5Q13069 117 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 GAGE6Q13070 117 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 ZNF77Q15935 545 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 TMEM225Q6GV28 225 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 ADAD2Q8NCV1 583 aaKnown RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 ABHD5Q8WTS1 349 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 GMPPAQ96IJ6 420 aaPredicted RBP10.45□□□□□ -0.74
SNIP1-201ENST00000296215 GOLGA2P5Q9HBQ8 144 aa10.45□□□□□ -0.74
SNIP1-201ENST00000296215 C4AP0C0L4 1744 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 C4BP0C0L5 1744 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 MSGN1A6NI15 193 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 H3BVH4 76 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 CD160O95971 181 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 SRP19P09132 144 aaKnown RBP10.44□□□□□ -0.74
SNIP1-201ENST00000296215 NTHL1P78549 312 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 BIVMQ86UB2 503 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 RBMXL3Q8N7X1 1067 aaKnown RBP10.44□□□□□ -0.74
SNIP1-201ENST00000296215 OR1L3Q8NH93 324 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 PPP1R35Q8TAP8 253 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 MRPL18Q9H0U6 180 aaKnown RBP10.44□□□□□ -0.74
SNIP1-201ENST00000296215 NUMA1Q14980 2115 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 C1QTNF3-AMACRE9PGA6 284 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 F8VVB4 439 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 F8VWA3 439 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 KLF4O43474 513 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 CEACAM6P40199 344 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 GDF7Q7Z4P5 450 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 OOSP2Q86WS3 158 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 H1FOOQ8IZA3 346 aaPredicted RBP10.44□□□□□ -0.74
SNIP1-201ENST00000296215 OR2A5Q96R48 311 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 SSBP4Q9BWG4 385 aaPredicted RBP10.44□□□□□ -0.74
SNIP1-201ENST00000296215 MFRPQ9BY79 579 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 SLC52A3Q9NQ40 469 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 CACNA1FO60840 1977 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 MYBPHLA2RUH7 354 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 H3BMH7 237 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 COX5AP20674 150 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 ZNF562Q6V9R5 426 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 ASCL4Q6XD76 172 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 THSD4Q6ZMP0 1018 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 MRPL30Q8TCC3 161 aaKnown RBP10.44□□□□□ -0.74
SNIP1-201ENST00000296215 NEURL3Q96EH8 262 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 MRPS18AQ9NVS2 196 aaKnown RBP10.44□□□□□ -0.74
SNIP1-201ENST00000296215 STRCQ7RTU9 1775 aa10.44□□□□□ -0.74
SNIP1-201ENST00000296215 PPIAL4EA0A075B759 164 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 SOX1O00570 391 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 S1PR2O95136 353 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 CLDN7O95471 211 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 ONECUT2O95948 504 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 PPIAL4FP0DN26 164 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 TSPOP30536 169 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms